RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 HMGB4Q8WW32 186 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR5P2Q8WZ92 322 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 FBXL18Q96ME1 805 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 FTCDNL1E5RQL4 147 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 EMC8O43402 210 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SOX14O95416 240 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SFTPBP07988 381 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 UCHL1P09936 223 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ADRB3P13945 408 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PORP16435 677 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF16P17020 682 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GPX6P59796 221 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MS4A13Q5J8X5 152 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SPANXN4Q5MJ08 99 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR8J1Q8NGP2 316 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ARL11Q969Q4 196 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 LRRC46Q96FV0 321 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 EPHA6Q9UF33 1036 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 RFPL2O75678 378 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SIX3O95343 332 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GK2Q14410 553 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CDNFQ49AH0 187 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MINDY1Q8N5J2 469 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SCAMP5Q8TAC9 235 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MSANTD3Q96H12 275 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 C1orf74Q96LT6 269 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 RAD9AQ99638 391 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MCHR1Q99705 422 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NPIPA2E9PIF3 369 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NPIPA3F8WFD2 350 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PEX12O00623 359 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 IFNA17P01571 189 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF35P13682 527 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PMS2P3Q13401 168 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 RCAN2Q14206 197 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF169Q14929 603 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 EXOC3L2Q2M3D2 409 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GSG1LQ6UXU4 331 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TICAM1Q8IUC6 712 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MS4A15Q8N5U1 240 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR4K14Q8NGD5 310 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 HOXD1Q9GZZ0 328 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TCRBV7S3A2A0A539 114 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 IFNA10P01566 189 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MAP2K4P45985 399 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ARSIQ5FYB1 569 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR6N1Q8NGY5 312 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR8S1Q8NH09 359 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PHOSPHO1Q8TCT1 267 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 DEFB118Q96PH6 123 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 OR4K3Q96R72 315 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 BEX2Q9BXY8 128 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 DNTTIP1Q9H147 329 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 BEX1Q9HBH7 125 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 GPRC5BQ9NZH0 403 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 ERVK-19Q9WJR5 959 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CSF1P09603 554 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 MAOAP21397 527 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 PPP5CP53041 499 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 RPS15AP62244 130 aaKnown RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TIGD3Q6B0B8 471 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NANOGP8Q6NSW7 305 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SLC18B1Q6NT16 456 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 COMMD7Q86VX2 200 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 TCEANCQ8N8B7 351 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CASTOR1Q8WTX7 329 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NAA11Q9BSU3 229 aaPredicted RBP7.66□□□□□ -1.18
LIMD1-201ENST00000273317 NANOGQ9H9S0 305 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 CPNE5Q9HCH3 593 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 WDR45Q9Y484 360 aa7.66□□□□□ -1.18
LIMD1-201ENST00000273317 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 MT-CO2P00403 227 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 FGF3P11487 239 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 RPS2P15880 293 aaKnown RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 HOXC8P31273 242 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 GDPGP1Q6ZNW5 385 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 C12orf42Q96LP6 360 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 TCEAL7Q9BRU2 100 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 SERTAD3Q9UJW9 196 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 KIAA0513O60268 411 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 ACRV1P26436 265 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 CDKN2CP42773 168 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 MANEALQ5VSG8 457 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 STEAP4Q687X5 459 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 SLC7A13Q8TCU3 470 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 YIPF1Q9Y548 306 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 TJP1Q07157 1748 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 PRKXP51817 358 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 RPS24P62847 133 aaKnown RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 MSS51Q4VC12 460 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 UNC5DQ6UXZ4 953 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 TRAM1L1Q8N609 369 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF283Q8N7M2 679 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 BORCS7Q96B45 105 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 SLC6A7Q99884 636 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 SAV1Q9H4B6 383 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 GPN2Q9H9Y4 310 aaPredicted RBP7.65□□□□□ -1.18
LIMD1-201ENST00000273317 PRAF2O60831 178 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 CLDN7O95471 211 aa7.65□□□□□ -1.18
LIMD1-201ENST00000273317 HSD17B1P14061 328 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms