RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 HDAC3O15379 428 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 CTNSO60931 367 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 MYO1DO94832 1006 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 LRATO95237 230 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 KRT16P08779 473 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 TROVE2P10155 538 aaKnown RBP eCLIP17.17■□□□□ 0.34
SDF4-201ENST00000263741 EPHA3P29320 983 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 STX4Q12846 297 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 TBR1Q16650 682 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 DCAF10Q5QP82 559 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 OR52E8Q6IFG1 317 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 MED25Q71SY5 747 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 DNAJB14Q8TBM8 379 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 FCRL1Q96LA6 429 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 WDR41Q9HAD4 459 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 MEAF6Q9HAF1 191 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 SIRT5Q9NXA8 310 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 PCDHA9Q9Y5H5 950 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 IGSF10Q6WRI0 2623 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 Q0VFX4 171 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 SLC9B1Q4ZJI4 515 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 PAPD4Q6PIY7 484 aaKnown RBP17.17■□□□□ 0.34
SDF4-201ENST00000263741 KIF2BQ8N4N8 673 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 ERP27Q96DN0 273 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 ING2Q9H160 280 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 LRMDAQ9H2I8 198 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 CXorf56Q9H5V9 222 aa17.17■□□□□ 0.34
SDF4-201ENST00000263741 NSG1A0A0A6YYJ2 146 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 A6NL46 340 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 ZNF195O14628 629 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 HNRNPCL1O60812 293 aaKnown RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 IFNA16P05015 189 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 BCKDHAP12694 445 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 PTGR1Q14914 329 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 ANKRD26P1Q6NSI1 321 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 DGAT2L6Q6ZPD8 337 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 LIX1Q8N485 282 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 NUDT8Q8WV74 236 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 PPWD1Q96BP3 646 aaKnown RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 MYLK2Q9H1R3 596 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 C19orf25Q9UFG5 118 aaPredicted RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 EXO1Q9UQ84 846 aaKnown RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 CPAMD8Q8IZJ3 1885 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 AKAP10O43572 662 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 ERAL1O75616 437 aaKnown RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 PRR35P0CG20 571 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 DUSP2Q05923 314 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 C2orf80Q0P641 193 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 PRSS53Q2L4Q9 553 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 IL23RQ5VWK5 629 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 BORAQ6PGQ7 559 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 TMEM132CQ8N3T6 1108 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 EXOSC8Q96B26 276 aaKnown RBP17.16■□□□□ 0.34
SDF4-201ENST00000263741 CATSPER2Q96P56 530 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 CCT7Q99832 543 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 ZNF700Q9H0M5 742 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 MYNNQ9NPC7 610 aa17.16■□□□□ 0.34
SDF4-201ENST00000263741 CNTRLQ7Z7A1 2325 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 C1orf226A1L170 272 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 GUCY1B2O75343 617 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 CYC1P08574 325 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 TRA2BP62995 288 aaKnown RBP17.15■□□□□ 0.34
SDF4-201ENST00000263741 SLC48A1Q6P1K1 146 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 NDUFAF7Q7L592 441 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 KIRREL3Q8IZU9 778 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.15■□□□□ 0.34
SDF4-201ENST00000263741 TANKQ92844 425 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 MARK4Q96L34 752 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 IP6K3Q96PC2 410 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 FAIM2Q9BWQ8 316 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 PFDN4Q9NQP4 134 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 CES1P1Q9UKY3 287 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 C15orf41Q9Y2V0 281 aa17.15■□□□□ 0.34
SDF4-201ENST00000263741 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.34
SDF4-201ENST00000263741 DIAPH2O60879 1101 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 HPP00738 406 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 FAM87AP0C7U9 286 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 FEN1P39748 380 aaKnown RBP17.14■□□□□ 0.33
SDF4-201ENST00000263741 CCL11P51671 97 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 DIO3P55073 304 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 FAM71E1Q6IPT2 247 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 METTL2AQ96IZ6 378 aaKnown RBP17.14■□□□□ 0.33
SDF4-201ENST00000263741 OR52B2Q96RD2 323 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 VTI1BQ9UEU0 232 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 UTS2RQ9UKP6 389 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 TMED5Q9Y3A6 229 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 A0A1W2PQ72 361 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 GPR75O95800 540 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 PIK3R1P27986 724 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 IGLV3-21P80748 117 aaPredicted RBP17.14■□□□□ 0.33
SDF4-201ENST00000263741 BTBD16Q32M84 506 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 NXNQ6DKJ4 435 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 LARP4Q71RC2 724 aaKnown RBP eCLIP17.14■□□□□ 0.332e-17■■■□□ 18.2
SDF4-201ENST00000263741 TICAM1Q8IUC6 712 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 CLEC1AQ8NC01 280 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 C10orf82Q8WW14 230 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 APOBEC4Q8WW27 367 aaKnown RBP17.14■□□□□ 0.33
SDF4-201ENST00000263741 NACC2Q96BF6 587 aa17.14■□□□□ 0.33
SDF4-201ENST00000263741 IMMP1LQ96LU5 166 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms