RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 CATSPEREQ5SY80 951 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 UNC5DQ6UXZ4 953 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 LARP4Q71RC2 724 aaKnown RBP eCLIP10.29□□□□□ -0.76
CD44-201ENST00000263398 UBE2Q1Q7Z7E8 422 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ANKRD13BQ86YJ7 626 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ADGRG5Q8IZF4 528 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 FAM86B1Q8N7N1 296 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 RHBDF1Q96CC6 855 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ZNF597Q96LX8 424 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 IL26Q9NPH9 171 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 NOP16Q9Y3C1 178 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 CCDC88AQ3V6T2 1871 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ZNF860A6NHJ4 632 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 WASH4PA8MWX3 477 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 RTCAO00442 366 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 ZNF208O43345 1280 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 PRKYO43930 277 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 PPM1BO75688 479 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 GNSP15586 552 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 TYRP1P17643 537 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 PYCR1P32322 319 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 BMXP51813 675 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 NCS1P62166 190 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 FAM189BP81408 668 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 UGT8Q16880 541 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 C22orf42Q6IC83 251 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 COMMD6Q7Z4G1 85 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SLC5A8Q8N695 610 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SPERTQ8NA61 448 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 OR52P1PQ8NH57 321 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SLC2A4RGQ9NR83 387 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 MLXQ9UH92 298 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ALG5Q9Y673 324 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 TJP1Q07157 1748 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 MYO10Q9HD67 2058 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 TRAV6A0A075B6T7 132 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 SLC22A31A6NKX4 558 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 CLCA1A8K7I4 914 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 SLC16A8O95907 504 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 CSTBP04080 98 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 NDUFV2P19404 249 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 RPL6Q02878 288 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 VEZF1Q14119 521 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 MAD2L1BPQ15013 274 aaPredicted RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 DEFB134Q4QY38 66 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 ARHGAP40Q5TG30 622 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 CRTC1Q6UUV9 634 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 GALNT10Q86SR1 603 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD44-201ENST00000263398 PNPLA1Q8N8W4 532 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 ASCC1Q8N9N2 400 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 ABHD11Q8NFV4 315 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 NXPE2Q96DL1 559 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 APIPQ96GX9 242 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 POLDIP3Q9BY77 421 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 OR8D2Q9GZM6 311 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 TREX1Q9NSU2 369 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 STOX2Q9P2F5 926 aaPredicted RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 PCP4L1A6NKN8 68 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 GRXCR1A8MXD5 290 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 C9J4A7 227 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 ZNF878C9JN71 531 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 ANHXE9PGG2 379 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 EDIL3O43854 480 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 UGDHO60701 494 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 MITFO75030 526 aaPredicted RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 CSTAP01040 98 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 HNRNPA1P09651 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
CD44-201ENST00000263398 CEBPGP53567 150 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 FOXA1P55317 472 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 PSMA6P60900 246 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 RPS26P62854 115 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 DEFA5Q01523 94 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 C18orf21Q32NC0 220 aaPredicted RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 PUS10Q3MIT2 529 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 ARHGAP12Q8IWW6 846 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 SLC44A3Q8N4M1 653 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 OR4K5Q8NGD3 323 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 NETO1Q8TDF5 533 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 FRS2Q8WU20 508 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 TMEM19Q96HH6 336 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 LHPPQ9H008 270 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 METTL8Q9H825 291 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 STUB1Q9UNE7 303 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 C2orf74A8MZ97 194 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 ARNTLO00327 626 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 KHNYNO15037 678 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 MRPS14O60783 128 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 EDN1P05305 212 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 MRPL3P09001 348 aaKnown RBP10.28□□□□□ -0.76
CD44-201ENST00000263398 PTNP21246 168 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 AGXTP21549 392 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 GABRA3P34903 492 aa10.28□□□□□ -0.76
CD44-201ENST00000263398 SOX2P48431 317 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms