RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 N6AMT1Q9Y5N5 214 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 UGDHO60701 494 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 LATS1O95835 1130 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 EFEMP2O95967 443 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 GPC1P35052 558 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 BUD31P41223 144 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 PRMT2P55345 433 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CSNK2BP67870 215 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CD83Q01151 205 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 EEF1A2Q05639 463 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 FAM71E1Q6IPT2 247 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 REEP3Q6NUK4 255 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 NXPE4Q6UWF7 544 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TMC5Q6UXY8 1006 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TMPRSS11AQ6ZMR5 421 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 C6orf120Q7Z4R8 191 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 VN1R5Q7Z5H4 357 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 NLRP8Q86W28 1048 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 FAM46DQ8NEK8 389 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ART5Q96L15 291 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 FYTTD1Q96QD9 318 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 GPA33Q99795 319 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CCDC177Q9NQR7 707 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 FKBP14Q9NWM8 211 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 NOX1Q9Y5S8 564 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SPIN1Q9Y657 262 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 ISPDA4D126 451 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PLPP1O14494 284 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PTTG1O95997 202 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 DGKGP49619 791 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PRLHRP49683 370 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SLC7A9P82251 487 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZNF91Q05481 1191 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PRKCDQ05655 676 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CDC20Q12834 499 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZNF367Q7RTV3 350 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SPRED2Q7Z698 418 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 IQCHQ86VS3 1027 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZNF547Q8IVP9 402 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CPXM2Q8N436 756 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 OR9A1PQ8NGU1 263 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.02
MSH4-201ENST00000263187 JPH3Q8WXH2 748 aaPredicted RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 ASB15Q8WXK1 588 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 OR2A14Q96R47 310 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 CTRCQ99895 268 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 RACGAP1Q9H0H5 632 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 EGLN3Q9H6Z9 239 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 SPHK2Q9NRA0 654 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 COMMD3Q9UBI1 195 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 NUFIP1Q9UHK0 495 aaKnown RBP8.67□□□□□ -1.02
MSH4-201ENST00000263187 ZNF221Q9UK13 617 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 PPIL1Q9Y3C6 166 aa8.67□□□□□ -1.02
MSH4-201ENST00000263187 A0A1B0GVC2 190 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 A6NIN4 97 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 NPIPB8E9PQR5 432 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 MYL12BO14950 172 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 TMCC2O75069 709 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 FGF18O76093 207 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 RHCEP18577 417 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PSMA1P25786 263 aaKnown RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 ELAVL4P26378 380 aaKnown RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 ETV5P41161 510 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ETV1P50549 477 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PNLIPRP1P54315 467 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 OLR1P78380 273 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ALDH6A1Q02252 535 aaKnown RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 TBRG1Q3YBR2 411 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 FBXO43Q4G163 708 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ACSM5Q6NUN0 579 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ERAP2Q6P179 960 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PAMR1Q6UXH9 720 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 NANOGNBQ7Z5D8 188 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 TECPR1Q7Z6L1 1165 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 LHFPL3Q86UP9 236 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 C12orf40Q86WS4 652 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PLA2G15Q8NCC3 412 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 SLC9A6Q92581 669 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 DIRAS2Q96HU8 199 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 LRR1Q96L50 414 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 SLC6A18Q96N87 628 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 OSGEPL1Q9H4B0 414 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 TDP1Q9NUW8 608 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 KLHL42Q9P2K6 505 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 SLC23A2Q9UGH3 650 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ATP6V1HQ9UI12 483 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 HEPACAM2A8MVW5 462 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 EIF3FO00303 357 aaPredicted RBP8.66□□□□□ -1.02
MSH4-201ENST00000263187 SLITRK5O94991 958 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 IFNA14P01570 189 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 ARAFP10398 606 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 NR2F1P10589 423 aa8.66□□□□□ -1.02
MSH4-201ENST00000263187 CSF2RAP15509 400 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms