RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PRKACBP22694 351 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CHMP24386 653 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CBSP35520 551 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PTH2RP49190 550 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 OC90Q02509 493 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 ZNF789Q5FWF6 425 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ATAD3CQ5T2N8 411 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ZNF584Q8IVC4 421 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 SLC5A8Q8N695 610 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 TCEAL4Q96EI5 215 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 RBPJLQ9UBG7 517 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ROBO1Q9Y6N7 1651 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 SLIT3O75094 1523 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 UBFD1O14562 309 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 HSPA12AO43301 675 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 DUSP11O75319 330 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 GJB5O95377 273 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 NPPAP01160 153 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CAPN3P20807 821 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CNR2P34972 360 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PTGER1P34995 402 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 AQP2P41181 271 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ERVK-25P63136 954 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ATG9BQ674R7 924 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 EIF5AL1Q6IS14 154 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 PLA2G15Q8NCC3 412 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ACOT12Q8WYK0 555 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 LMF1Q96S06 567 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 SYT4Q9H2B2 425 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 DUOX1Q9NRD9 1551 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 A0A1B0GVI7 797 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 SNNO75324 88 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 ATE1O95260 518 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CRYZL1O95825 349 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 POLR2CP19387 275 aaPredicted RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 MAGEA3P43357 314 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 PPP5CP53041 499 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 BATFQ16520 125 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ALG10Q5BKT4 473 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 KIF18BQ86Y91 864 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 TTLQ8NG68 377 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 OR9A1PQ8NGU1 263 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 UTP4Q969X6 686 aaKnown RBP11.56□□□□□ -0.56
SMG6-201ENST00000263073 MYRFLQ96LU7 910 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 F2RL3Q96RI0 385 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 ELOVL2Q9NXB9 296 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 HEBP2Q9Y5Z4 205 aa11.56□□□□□ -0.56
SMG6-201ENST00000263073 CARNS1A5YM72 827 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 ARPC5O15511 151 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 PLGP00747 810 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 GGT1P19440 569 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 GCGRP47871 477 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 OR56A1Q8NGH5 318 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 SMCO3A2RU48 225 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 ANHXE9PGG2 379 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 TRAPPC6AO75865 159 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 FGF19O95750 216 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 LIPCP11150 499 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 LEPRP48357 1165 aaKnown RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 WNT7BP56706 349 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 TMEM115Q12893 351 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 RIN1Q13671 783 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 DUS1LQ6P1R4 473 aaKnown RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 PLBD1Q6P4A8 553 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 UGT2A3Q6UWM9 527 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 ZFAND4Q86XD8 727 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 CPED1A4D0V7 1026 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 POM121CA8CG34 1229 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 HPRP00739 348 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 OAS1P00973 400 aaKnown RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 CA5AP35218 305 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 ARL3P36405 182 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 GRIA2P42262 883 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 HERV-K104P61576 105 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 PRKCZQ05513 592 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 CHRFAM7AQ494W8 412 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 MLIPQ5VWP3 458 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 CDCA2Q69YH5 1023 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 PNCKQ6P2M8 343 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 FIGNL1Q6PIW4 674 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 LRFN4Q6PJG9 635 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 TPRG1Q6ZUI0 275 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 OR4K3Q96R72 315 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 PFDN5Q99471 154 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 OR8D2Q9GZM6 311 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 MRM3Q9HC36 420 aaKnown RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 Q9N2J8 555 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
SMG6-201ENST00000263073 ZNF225Q9UK10 706 aa11.55□□□□□ -0.56
SMG6-201ENST00000263073 SCML2Q9UQR0 700 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms