RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 OR5K3A6NET4 321 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 TMEM150CB9EJG8 249 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
SGCA-201ENST00000262018 ANGPT2O15123 496 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 EEDO75530 441 aaKnown RBP12.53□□□□□ -0.4
SGCA-201ENST00000262018 BCKDHAP12694 445 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 RAB28P51157 221 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 TDGF1P3P51864 188 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 PSME3P61289 254 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 Q0VFX4 171 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 SLBPQ14493 270 aaKnown RBP eCLIP12.53□□□□□ -0.4
SGCA-201ENST00000262018 KPNB1Q14974 876 aaKnown RBP12.53□□□□□ -0.4
SGCA-201ENST00000262018 TLR1Q15399 786 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 PIGGQ5H8A4 983 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 THEMIS2Q5TEJ8 643 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 ICE2Q659A1 982 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 C17orf64Q86WR6 236 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 FAM9CQ8IZT9 166 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 LIX1Q8N485 282 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 LINC01555Q8NAE3 123 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 GLB1L3Q8NCI6 653 aaPredicted RBP12.53□□□□□ -0.4
SGCA-201ENST00000262018 UBE2E3Q969T4 207 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 APIPQ96GX9 242 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 CDRT15Q96T59 188 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 VPS29Q9UBQ0 182 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 GPN3Q9UHW5 284 aaPredicted RBP12.53□□□□□ -0.4
SGCA-201ENST00000262018 PCDHGB6Q9Y5F9 930 aa12.53□□□□□ -0.4
SGCA-201ENST00000262018 ACANP16112 2415 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 CCDC154A6NI56 674 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 C9JVG2 144 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 CFLARO15519 480 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 FKBP6O75344 327 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 PDE5AO76074 875 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 CDH1P12830 882 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 CA7P43166 264 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 ACTR3P61158 418 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 AIMP2Q13155 320 aaKnown RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 AGAP7PQ5VUJ5 663 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 ZNF324BQ6AW86 544 aaPredicted RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 PRMT9Q6P2P2 845 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 AAGABQ6PD74 315 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 IGFL2Q6UWQ7 119 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 PPP1R32Q7Z5V6 425 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 RNF175Q8N4F7 328 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 C2orf73Q8N5S3 287 aaPredicted RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 ABHD11Q8NFV4 315 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 HUS1BQ8NHY5 278 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 AGAP4Q96P64 663 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 MTERF1Q99551 399 aaKnown RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 ZBTB18Q99592 522 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 NRTNQ99748 197 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 GPATCH1Q9BRR8 931 aaKnown RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 DPY30Q9C005 99 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 XKR8Q9H6D3 395 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 EPS8L2Q9H6S3 715 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 TAC3Q9UHF0 121 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 LEF1Q9UJU2 399 aaPredicted RBP12.52□□□□□ -0.41
SGCA-201ENST00000262018 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
SGCA-201ENST00000262018 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 MAGEB17A8MXT2 336 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 C2orf74A8MZ97 194 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 ALOX12BO75342 701 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 ENTPD5O75356 428 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 PCNAP12004 261 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 CLDN8P56748 225 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 FOXL2P58012 376 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 DDX39BQ13838 428 aaKnown RBP12.51□□□□□ -0.41
SGCA-201ENST00000262018 PTGR1Q14914 329 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 CMPK2Q5EBM0 449 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 RIPOR1Q6ZS17 1223 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 ADGRF3Q8IZF5 1079 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 KRT78Q8N1N4 520 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 DPP10Q8N608 796 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 CATSPER1Q8NEC5 780 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 OR4K1Q8NGD4 311 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 NR4A3Q92570 626 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 C11orf24Q96F05 449 aaPredicted RBP12.51□□□□□ -0.41
SGCA-201ENST00000262018 C17orf62Q9BQA9 187 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
SGCA-201ENST00000262018 SPNS1Q9H2V7 528 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 GSX1Q9H4S2 264 aaPredicted RBP12.51□□□□□ -0.41
SGCA-201ENST00000262018 NT5DC2Q9H857 520 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 SEMA3GQ9NS98 782 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 SIRT5Q9NXA8 310 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 SERTAD3Q9UJW9 196 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 POMPQ9Y244 141 aa12.51□□□□□ -0.41
SGCA-201ENST00000262018 RUVBL1Q9Y265 456 aaKnown RBP12.51□□□□□ -0.41
SGCA-201ENST00000262018 GSAPA4D1B5 854 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms