RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
CDH1-201ENST00000261769 UFD1Q92890 307 aa13.28□□□□□ -0.28
CDH1-201ENST00000261769 PDLIM5Q96HC4 596 aaKnown RBP13.28□□□□□ -0.28
CDH1-201ENST00000261769 CNDP2Q96KP4 475 aaKnown RBP13.28□□□□□ -0.28
CDH1-201ENST00000261769 SP140LQ9H930 580 aa13.28□□□□□ -0.28
CDH1-201ENST00000261769 IGSF5Q9NSI5 407 aa13.28□□□□□ -0.28
CDH1-201ENST00000261769 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 PABPC4LP0CB38 370 aaKnown RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 NELFEP18615 380 aaKnown RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 OR2B6P58173 313 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 ARG2P78540 354 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 HTRA4P83105 476 aaPredicted RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 PYDC2Q56P42 97 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 NANOGP8Q6NSW7 305 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 CARM1Q86X55 608 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 ALDH16A1Q8IZ83 802 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 OR5T3Q8NGG3 340 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 OR13J1Q8NGT2 312 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 OR2L8Q8NGY9 312 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 CLCC1Q96S66 551 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 POLDIP3Q9BY77 421 aaKnown RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 NANOGQ9H9S0 305 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 IL37Q9NZH6 218 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 TNFRSF10DQ9UBN6 386 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.28
CDH1-201ENST00000261769 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
CDH1-201ENST00000261769 MYOCOSA0A1B0GUC4 107 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 PROM1O43490 865 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CDC40O60508 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDH1-201ENST00000261769 FOXD2O60548 495 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 ZNF888P0CJ79 500 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 HK1P19367 917 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 AHRP35869 848 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 SLC15A1P46059 708 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 KIAA1024LP59773 190 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 FAM189A2Q15884 450 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 TAZQ16635 292 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CCSAPQ6IQ19 270 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 HSDL2Q6YN16 418 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CDHR3Q6ZTQ4 885 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 OR5K2Q8NHB8 316 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 NEIL2Q969S2 332 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 SLC6A18Q96N87 628 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CLEC4MQ9H2X3 399 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 EHD1Q9H4M9 534 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 PCDHB14Q9Y5E9 798 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 DNAJC15Q9Y5T4 150 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 EFCAB7A8K855 629 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 RPLP0P05388 317 aaKnown RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 MAP3K8P41279 467 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CBX5P45973 191 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 RRADP55042 308 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 KANK2Q63ZY3 851 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 RPL13AP3Q6NVV1 102 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 AQP11Q8NBQ7 271 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 OR10Q1Q8NGQ4 319 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ZNF480Q8WV37 535 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CDC6Q99741 560 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ACTRT3Q9BYD9 372 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 TPK1Q9H3S4 243 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ADRA1AP35348 466 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 CLRN1P58418 232 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 GTF2IRD2BQ6EKJ0 949 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 KCTD8Q6ZWB6 473 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 GTF2IRD2Q86UP8 949 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 BIRC7Q96CA5 298 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 ZNF317Q96PQ6 595 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 CHMP1AQ9HD42 196 aaPredicted RBP13.27□□□□□ -0.29
CDH1-201ENST00000261769 DMRT3Q9NQL9 472 aa13.27□□□□□ -0.29
CDH1-201ENST00000261769 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 C17orf105B2RV13 164 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 EI24O14681 340 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 TRA2BP62995 288 aaKnown RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 HYAL1Q12794 435 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 EFR3AQ14156 821 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 ZNF846Q147U1 533 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 SLC44A3Q8N4M1 653 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 OR14L1PQ8NHC6 308 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 MTHFD2LQ9H903 347 aaPredicted RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 NSG1A0A0A6YYJ2 146 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 PDHA2P29803 388 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
CDH1-201ENST00000261769 SH3BP2P78314 561 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 RHDQ02161 417 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 CNTN4Q8IWV2 1026 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
CDH1-201ENST00000261769 ZDHHC5Q9C0B5 715 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms