RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GAMTQ14353 236 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 PDK1Q15118 436 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 MOGAT2Q3SYC2 334 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF497Q6ZNH5 498 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CYP4V2Q6ZWL3 525 aaPredicted RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 PRSS42Q7Z5A4 293 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 SMYD1Q8NB12 490 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 OR6C4Q8NGE1 309 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 OR52K1Q8NGK4 314 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 RAB7BQ96AH8 199 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 BPIFA2Q96DR5 249 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 NUSAP1Q9BXS6 441 aaKnown RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 DPH5Q9H2P9 285 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 TRPC4Q9UBN4 977 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 DBF4Q9UBU7 674 aaPredicted RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 FETUBQ9UGM5 382 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 TEKT2Q9UIF3 430 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 MRPS18CQ9Y3D5 142 aaKnown RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CHTOPQ9Y3Y2 248 aaKnown RBP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 CLCA3PQ9Y6N3 262 aa3.71□□□□□ -1.82
CCDC54-201ENST00000261058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.71□□□□□ -1.82
CCDC54-201ENST00000261058 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ATP6AP2A0A1C7CYW4 349 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TMEM129A0AVI4 362 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SYCE3A1L190 88 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SHISA7A6NL88 538 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SOCS3O14543 225 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CRCPO75575 148 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ANGPTL1O95841 491 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 HMOX1P09601 288 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF883P0CG24 379 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TPBGLP0DKB5 382 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ODC1P11926 461 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CCND2P30279 289 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RFC4P35249 363 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CAMLGP49069 296 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CCR4P51679 360 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ERVK11-1P61568 191 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SNX1Q13596 522 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CUL2Q13617 745 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 DPYSQ14117 519 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 FASTKD3Q14CZ7 662 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 NECTIN1Q15223 517 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 FASTKD1Q53R41 847 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 NEK5Q6P3R8 708 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZYG11AQ6WRX3 759 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RBM43Q6ZSC3 357 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TAF8Q7Z7C8 310 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZFAND4Q86XD8 727 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF444Q8N0Y2 327 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LRRC43Q8N309 656 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LPCAT1Q8NF37 534 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 C8orf46Q8TAG6 207 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GOLGA5Q8TBA6 731 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RNASE8Q8TDE3 154 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GGHQ92820 318 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 C8orf76Q96K31 380 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PRICKLE1Q96MT3 831 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LRRC2Q9BYS8 371 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 VCX3BQ9H321 246 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 B3GAT2Q9NPZ5 323 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 DNAJC11Q9NVH1 559 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 DDX18Q9NVP1 670 aaKnown RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TEX10Q9NXF1 929 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TMOD3Q9NYL9 352 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PILRAQ9UKJ1 303 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 STX8Q9UNK0 236 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 FOXA2Q9Y261 457 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RNF215Q9Y6U7 377 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 UMODL1Q5DID0 1318 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 FAM205AQ6ZU69 1335 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PCNX3Q9H6A9 2034 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CCDC162PA2VCL2 907 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 CTAGE15A4D2H0 777 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 C5orf51A6NDU8 294 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ZSCAN5CA6NGD5 496 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 LRRIQ4A6NIV6 560 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 H0YCG3 227 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 H0YIV9 168 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 KIF2AO00139 706 aaPredicted RBP3.7□□□□□ -1.82
CCDC54-201ENST00000261058 RASGRF2O14827 1237 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SIGLEC5O15389 551 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 TNFSF12O43508 249 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 SYT7O43581 403 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 REC8O95072 547 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GHRP10912 638 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PRG2P13727 222 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 DPEP1P16444 411 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 ACKR3P25106 362 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 GIFP27352 417 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 PDHA2P29803 388 aa3.7□□□□□ -1.82
CCDC54-201ENST00000261058 S100A5P33763 92 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms