RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KLHL6Q8WZ60 621 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 TIFAQ96CG3 184 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 LRR1Q96L50 414 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 EFCAB11Q9BUY7 163 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 RACGAP1Q9H0H5 632 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 CFL2Q9Y281 166 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 SEMG1P04279 462 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 CYP17A1P05093 508 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 RHOP08100 348 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 CCT3P49368 545 aaKnown RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 RAB8AP61006 207 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 CSNK2BP67870 215 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 KCNC4Q03721 635 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 NOGQ13253 232 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 GINS1Q14691 196 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 ZNF630Q2M218 657 aaPredicted RBP12.84□□□□□ -0.35
VHL-201ENST00000256474 ZNF181Q2M3W8 571 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 MSANTD1Q6ZTZ1 278 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 OR56A3Q8NH54 315 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 COQ8BQ96D53 544 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 CNIH4Q9P003 139 aa12.84□□□□□ -0.35
VHL-201ENST00000256474 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 FFAR1O14842 300 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 LATS1O95835 1130 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ADH1AP07327 375 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 AVPR1BP47901 424 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CLCNKAP51800 687 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 BAK1Q16611 211 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 KIAA1161Q6NSJ0 714 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 GLCCI1Q86VQ1 547 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 DACT3Q96B18 629 aaPredicted RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 NUS1Q96E22 293 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CPEB1Q9BZB8 566 aaKnown RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 ACVR2AP27037 513 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 XCR1P46094 333 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ERVFC1P60507 584 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 SLC7A9P82251 487 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ZNF45Q02386 682 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ZFP69Q49AA0 526 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CCDC116Q8IYX3 515 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CPXM2Q8N436 756 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 MINDY2Q8NBR6 621 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 PLA2G15Q8NCC3 412 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 NLGN4YQ8NFZ3 816 aaPredicted RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 TMED9Q9BVK6 235 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 EGLN3Q9H6Z9 239 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 BRF2Q9HAW0 419 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 UGT2A1Q9Y4X1 527 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 PLPP1O14494 284 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 TSC22D2O75157 780 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CSO75390 466 aaKnown RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 NCR1O76036 304 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 C6P13671 934 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 RHCEP18577 417 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 LAG3P18627 525 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 PRPH2P23942 346 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 PRLHRP49683 370 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 ZNF517Q6ZMY9 492 aaPredicted RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 SPRED2Q7Z698 418 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 TMC8Q8IU68 726 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 KRT78Q8N1N4 520 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 SLC7A13Q8TCU3 470 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CPNE5Q9HCH3 593 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 SPATA7Q9P0W8 599 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 NUFIP1Q9UHK0 495 aaKnown RBP12.83□□□□□ -0.36
VHL-201ENST00000256474 OR1A2Q9Y585 309 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
VHL-201ENST00000256474 WDR87Q6ZQQ6 2873 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 A0A1W2PQ09 198 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
VHL-201ENST00000256474 DYRK3O43781 588 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ACP5P13686 325 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 MYL12AP19105 171 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 SLC6A11P48066 632 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 TBRG1Q3YBR2 411 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ABI3BPQ7Z7G0 1075 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 C12orf40Q86WS4 652 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 OR4D11Q8NGI4 311 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 ITPKCQ96DU7 683 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 MTERF3Q96E29 417 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 TTTY10Q9BZA0 68 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 CRNNQ9UBG3 495 aaPredicted RBP12.82□□□□□ -0.36
VHL-201ENST00000256474 KCNK6Q9Y257 313 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 UGDHO60701 494 aa12.82□□□□□ -0.36
VHL-201ENST00000256474 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.36
VHL-201ENST00000256474 INSL4Q14641 139 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms