RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IFI6P09912 130 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 COX6A1P12074 109 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 CPMP14384 443 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 PIK3R1P27986 724 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 XKP51811 444 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 PLIN5Q00G26 463 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 ACTN3Q08043 901 aaPredicted RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 STX4Q12846 297 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 SPRED3Q2MJR0 410 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 MFSD4BQ5TF39 518 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 BROXQ5VW32 411 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 LANCL3Q6ZV70 420 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 CPEB2Q7Z5Q1 589 aaKnown RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 CPSF7Q8N684 471 aaKnown RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 KRTCAP2Q8N6L1 136 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 OR8J2Q8NGG1 315 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 KLHL29Q96CT2 875 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 CNRIP1Q96F85 164 aaPredicted RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 ALOXE3Q9BYJ1 711 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 BHLHE41Q9C0J9 482 aaPredicted RBP13.21□□□□□ -0.29
VPS25-201ENST00000253794 CLMPQ9H6B4 373 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 ADAP2Q9NPF8 381 aa13.21□□□□□ -0.29
VPS25-201ENST00000253794 ZZEF1O43149 2961 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 K7ENP7 123 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 SLITRK5O94991 958 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 PORP16435 677 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 CSNK2A2P19784 350 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 GPX3P22352 226 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 ZFP36L2P47974 494 aaKnown RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 ALDH9A1P49189 494 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 OR4D2P58180 307 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 CDC20Q12834 499 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 MLC1Q15049 377 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 PRSS53Q2L4Q9 553 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 ZNF385BQ569K4 471 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 CCDC81Q6ZN84 652 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 RIPOR1Q6ZS17 1223 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 NDUFAF7Q7L592 441 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 CPLX4Q7Z7G2 160 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 MIER2Q8N344 545 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 LRRC25Q8N386 305 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 PPCDCQ96CD2 204 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 RILPQ96NA2 401 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 ELAC2Q9BQ52 826 aaKnown RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 MESP1Q9BRJ9 268 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 DPY30Q9C005 99 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 ACSS1Q9NUB1 689 aaPredicted RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 ATAD3AQ9NVI7 634 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 P4HTMQ9NXG6 502 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 C5AR2Q9P296 337 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 COPG1Q9Y678 874 aaKnown RBP13.2□□□□□ -0.3
VPS25-201ENST00000253794 ZNF780BQ9Y6R6 833 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 PCSK5Q92824 1860 aa13.2□□□□□ -0.3
VPS25-201ENST00000253794 CCDC88CQ9P219 2028 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
VPS25-201ENST00000253794 A0A1W2PS29 197 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 SAGE2PA6NJ88 616 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 NKX2-8O15522 239 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 AKAP10O43572 662 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 SLC22A3O75751 556 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 LRATO95237 230 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 FAM107AO95990 144 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 HPP00738 406 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 OTX2P32243 289 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 GPR143P51810 404 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 UFM1P61960 85 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
VPS25-201ENST00000253794 ATP1A4Q13733 1029 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 SQLEQ14534 574 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 CPTPQ5TA50 214 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 NFAM1Q8NET5 270 aaPredicted RBP13.19□□□□□ -0.3
VPS25-201ENST00000253794 OR14A16Q8NHC5 309 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 ZNF675Q8TD23 568 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 EXOSC8Q96B26 276 aaKnown RBP13.19□□□□□ -0.3
VPS25-201ENST00000253794 CTHRC1Q96CG8 243 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 ERP27Q96DN0 273 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 RBM18Q96H35 190 aaKnown RBP13.19□□□□□ -0.3
VPS25-201ENST00000253794 MARK4Q96L34 752 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 TEX37Q96LM6 180 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 CATSPER2Q96P56 530 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 DCBLD2Q96PD2 775 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 CCT8L2Q96SF2 557 aa13.19□□□□□ -0.3
VPS25-201ENST00000253794 LPAR4Q99677 370 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms