RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 C9orf64Q5T6V5 341 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 IQCHQ86VS3 1027 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 MKI67P46013 3256 aaKnown RBP17.54■□□□□ 0.4
LRP3-201ENST00000253193 WASHC1A8K0Z3 465 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 RORCP51449 518 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 WDR5P61964 334 aaKnown RBP17.54■□□□□ 0.4
LRP3-201ENST00000253193 SYPL1Q16563 259 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 WASH2PQ6VEQ5 465 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 PPP1R16AQ96I34 528 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 SLC35G5Q96KT7 338 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 SNX11Q9Y5W9 270 aa17.54■□□□□ 0.4
LRP3-201ENST00000253193 IDH3BO43837 385 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 CCL5P13501 91 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 NTSP30990 170 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 TIE1P35590 1138 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 EIF4HQ15056 248 aaKnown RBP17.53■□□□□ 0.4
LRP3-201ENST00000253193 PYDC2Q56P42 97 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 GDPD3Q7L5L3 318 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 TECPR1Q7Z6L1 1165 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 SLC9B2Q86UD5 537 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 PIK3R3Q92569 461 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 FOXE1O00358 373 aaPredicted RBP17.53■□□□□ 0.4
LRP3-201ENST00000253193 SEMG1P04279 462 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 SMIM11AP58511 58 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 GINS1Q14691 196 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 TUBA3EQ6PEY2 450 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 ARMC5Q96C12 935 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 RC3H2Q9HBD1 1191 aaKnown RBP17.53■□□□□ 0.4
LRP3-201ENST00000253193 TM7SF3Q9NS93 570 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 NDUFB5O43674 189 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 NR2F6P10588 404 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 ACP5P13686 325 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 OSMP13725 252 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 CASP3P42574 277 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 TGM4P49221 684 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 CCR8P51685 355 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 SLC16A1P53985 500 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 TAS2R41P59536 307 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 KHDRBS2Q5VWX1 349 aaKnown RBP17.53■□□□□ 0.4
LRP3-201ENST00000253193 SHFQ7M4L6 423 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.53■□□□□ 0.4
LRP3-201ENST00000253193 SMPDL3AQ92484 453 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 CAPN10Q9HC96 672 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 PLCXD1Q9NUJ7 323 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 GPR52Q9Y2T5 361 aa17.53■□□□□ 0.4
LRP3-201ENST00000253193 HAT1O14929 419 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 CAPN5O15484 640 aaPredicted RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 ADH1CP00326 375 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 RPN2P04844 631 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 TNFSF8P32971 234 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 UGT2B10P36537 528 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 MPEG1Q2M385 716 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 CRTC2Q53ET0 693 aaPredicted RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 TSEN54Q7Z6J9 526 aaKnown RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 NUDT13Q86X67 352 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 OR5P2Q8WZ92 322 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 ZNF514Q96K75 400 aaPredicted RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 TMEM38AQ9H6F2 299 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 SP140LQ9H930 580 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 CCDC88CQ9P219 2028 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 FGBP02675 491 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 CD72P21854 359 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 C22orf42Q6IC83 251 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 PAQR6Q6TCH4 344 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 ZFP41Q8N8Y5 198 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 SLC9A6Q92581 669 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 ZNF486Q96H40 463 aaPredicted RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 LRR1Q96L50 414 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 C12orf66Q96MD2 445 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 ZBP1Q9H171 429 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 NEK6Q9HC98 313 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 SMURF1Q9HCE7 757 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 H2AFY2Q9P0M6 372 aaPredicted RBP17.52■□□□□ 0.4
LRP3-201ENST00000253193 ZNF221Q9UK13 617 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 ITGB1BP2Q9UKP3 347 aa17.52■□□□□ 0.4
LRP3-201ENST00000253193 PRAMEF25A6NGN4 478 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 CSF2P04141 144 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 ATAT1Q5SQI0 421 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 FAM46CQ5VWP2 391 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 LAPTM4BQ86VI4 370 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 DCUN1D3Q8IWE4 304 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 ART5Q96L15 291 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 OR51I1Q9H343 314 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 MGAT4BQ9UQ53 548 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 CARD8Q9Y2G2 431 aa17.52■□□□□ 0.39
LRP3-201ENST00000253193 FAM47E-STBD1D6RA91 191 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 PLPP1O14494 284 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 PRKRAO75569 313 aaKnown RBP17.51■□□□□ 0.39
LRP3-201ENST00000253193 CLTBP09497 229 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 DDCP20711 480 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 RFX3P48380 749 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 LIM2P55344 173 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 TMC5Q6UXY8 1006 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 CCDC116Q8IYX3 515 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 GPR151Q8TDV0 419 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 FCRL1Q96LA6 429 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 THSD1Q9NS62 852 aa17.51■□□□□ 0.39
LRP3-201ENST00000253193 COMMD3Q9UBI1 195 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms