RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SLC25A19Q9HC21 320 aa20.54■□□□□ 0.88
SH2D3A-201ENST00000245908 FZD3Q9NPG1 666 aa20.54■□□□□ 0.88
SH2D3A-201ENST00000245908 LHX9Q9NQ69 397 aa20.54■□□□□ 0.88
SH2D3A-201ENST00000245908 MGAT4BQ9UQ53 548 aa20.54■□□□□ 0.88
SH2D3A-201ENST00000245908 SEMA7AO75326 666 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 RPN2P04844 631 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 ELAVL4P26378 380 aaKnown RBP20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 POU1F1P28069 291 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 CCR8P51685 355 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 SNRPGP62308 76 aaKnown RBP20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 CNTN1Q12860 1018 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 HSPB3Q12988 150 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 CAMK2BQ13554 666 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 ZNF234Q14588 700 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 TCTN3Q6NUS6 607 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 SP7Q8TDD2 431 aaPredicted RBP20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 MENTQ9BUN1 341 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 PCBD2Q9H0N5 130 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 TLR4O00206 839 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 HMGN4O00479 90 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 S100A5P33763 92 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 VIPR2P41587 438 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 ILKQ13418 452 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 SEC23BQ15437 767 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 LEXMQ3ZCV2 418 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 LRRTM4Q86VH4 590 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 ATCAYQ86WG3 371 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 HEATR4Q86WZ0 1026 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 RAB8BQ92930 207 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 HOXD1Q9GZZ0 328 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 TMEM245Q9H330 911 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 DEC1Q9P2X7 70 aa20.53■□□□□ 0.88
SH2D3A-201ENST00000245908 FAAHO00519 579 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 NDUFB5O43674 189 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 GSTM5P46439 218 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 KCNJ5P48544 419 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 MED22Q15528 200 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 TSTQ16762 297 aaKnown RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 TIMM50Q3ZCQ8 353 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 SPDYE7PQ495Y7 208 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 TMEM201Q5SNT2 666 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 DCST1Q5T197 706 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 SLX4IPQ5VYV7 408 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 NUDT13Q86X67 352 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ZBED6CLQ96FA7 236 aaPredicted RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 PAWRQ96IZ0 340 aaKnown RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ZNF354BQ96LW1 612 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 Q96MT0 163 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 PITHD1Q9GZP4 211 aaPredicted RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 C11orf16Q9NQ32 467 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 C5AR2Q9P296 337 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ZNF229Q9UJW7 825 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 PEX16Q9Y5Y5 336 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 FEZF1A0PJY2 475 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 CCRL2O00421 344 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 TBX1O43435 398 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 PSMB5P28074 263 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 P2RY2P41231 377 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 IFITM2Q01629 132 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ATAD3BQ5T9A4 648 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 METRNLQ641Q3 311 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 STEAP3Q658P3 488 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 AKAP14Q86UN6 197 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 WDR36Q8NI36 951 aaKnown RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 EXOSC8Q96B26 276 aaKnown RBP20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 TAPBPLQ9BX59 468 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ROGDIQ9GZN7 287 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 ACAD8Q9UKU7 415 aa20.52■□□□□ 0.88
SH2D3A-201ENST00000245908 A0A1W2PPV9 198 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 HEPACAM2A8MVW5 462 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 NDUFS4O43181 175 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 TMPRSS11DO60235 418 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 SH3BP5O60239 455 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ENTPD6O75354 484 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 NFATC1O95644 943 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 H1F0P07305 194 aaKnown RBP20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 OPRD1P41143 372 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 DGKEP52429 567 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 SFTPA1Q8IWL2 248 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 RASSF5Q8WWW0 418 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 RGMAQ96B86 450 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ZFYVE19Q96K21 471 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 HDAC8Q9BY41 377 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ACSS1Q9NUB1 689 aaPredicted RBP20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ADAM29Q9UKF5 820 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 OTOL1A6NHN0 477 aaPredicted RBP20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ANHXE9PGG2 379 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 H7BY64 318 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 KIAA0513O60268 411 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 SLC13A2Q13183 592 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 C12orf73Q69YU5 71 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 PARP16Q8N5Y8 322 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 OR4D11Q8NGI4 311 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 PRAP1Q96NZ9 151 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 ZNF607Q96SK3 696 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 FUZQ9BT04 418 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 SERHL2Q9H4I8 314 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 TM7SF3Q9NS93 570 aa20.51■□□□□ 0.87
SH2D3A-201ENST00000245908 TEX10Q9NXF1 929 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms