RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CCDC116Q8IYX3 515 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 GALNT15Q8N3T1 639 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 UTP15Q8TED0 518 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 LMAN1LQ9HAT1 526 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PAPOLBQ9NRJ5 636 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 ZCCHC3Q9NUD5 404 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 POT1Q9NUX5 634 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 KIF17Q9P2E2 1029 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PILRAQ9UKJ1 303 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 TMEM265A0A087WTH1 108 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 J3KTA2 159 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 KIF1CO43896 1103 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 DNAJB5O75953 348 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 MFN2O95140 757 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 C8orf89P0DMQ9 161 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 SMIM10L1P0DMW3 83 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 CD247P20963 164 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 AGXTP21549 392 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 EPHA2P29317 976 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 RGS1Q08116 209 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PMS2P3Q13401 168 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 KEAP1Q14145 624 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 PUM1Q14671 1186 aaKnown RBP eCLIP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 GPR19Q15760 415 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 ZBED5Q49AG3 693 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 TMEM64Q6YI46 380 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 TTC29Q8NA56 475 aaPredicted RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 APOBEC4Q8WW27 367 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 RLN3Q8WXF3 142 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 SMIM10Q96HG1 83 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 SLC35G5Q96KT7 338 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 OR51I1Q9H343 314 aa17.47■□□□□ 0.39
HOXC11-201ENST00000243082 LYARQ9NX58 379 aaKnown RBP17.47■□□□□ 0.39
HOXC11-201ENST00000243082 A0A0J9YVX5 310 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 A0A1W2PPC4 97 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 E9PQ18 207 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 P2RX6O15547 441 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 OR12D1P0DN82 309 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 ALPPL2P10696 532 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 EEF1B2P24534 225 aaKnown RBP17.46■□□□□ 0.39
HOXC11-201ENST00000243082 ESRRGP62508 458 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 SPIBQ01892 262 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 CDK5R2Q13319 367 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 GPR141Q7Z602 305 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 FAM160A2Q8N612 972 aaPredicted RBP17.46■□□□□ 0.39
HOXC11-201ENST00000243082 SLC37A2Q8TED4 501 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 GIPC3Q8TF64 312 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 SGCDQ92629 289 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 KLHL25Q9H0H3 589 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 POLR1BQ9H9Y6 1135 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 PTTG2Q9NZH5 202 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 NDRG4Q9ULP0 352 aaKnown RBP17.46■□□□□ 0.39
HOXC11-201ENST00000243082 ENPP4Q9Y6X5 453 aa17.46■□□□□ 0.39
HOXC11-201ENST00000243082 SLC35G6P0C7Q6 338 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 FEN1P39748 380 aaKnown RBP17.45■□□□□ 0.38
HOXC11-201ENST00000243082 LSSP48449 732 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 RPS6KA3P51812 740 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 CDH12P55289 794 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 CEBPEQ15744 281 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SYPL1Q16563 259 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 B3GNT6Q6ZMB0 384 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SZRD1Q7Z422 152 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF605Q86T29 641 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 TSTD1Q8NFU3 115 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 GPR32P1Q8NGA4 272 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 OR5D16Q8NGK9 328 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 OR52J3Q8NH60 311 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 MAGED4Q96JG8 741 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF681Q96N22 645 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 EVA1BQ9NVM1 165 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 RSL24D1Q9UHA3 163 aaKnown RBP17.45■□□□□ 0.38
HOXC11-201ENST00000243082 CA14Q9ULX7 337 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ZNF451Q9Y4E5 1061 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 KLK4Q9Y5K2 254 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 KIR2DS5A0A0G2JLQ3 304 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 A0A0G2JNG1 304 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 KIR2DS3K7RE56 304 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 CSNK2A2P19784 350 aaPredicted RBP17.45■□□□□ 0.38
HOXC11-201ENST00000243082 MATN1P21941 496 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 FUT4P22083 530 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 LIMS1P48059 325 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 NPRL3Q12980 569 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 LSAMPQ13449 338 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 KIR2DS5Q14953 304 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SKIV2LQ15477 1246 aaKnown RBP17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
HOXC11-201ENST00000243082 EXOC3L2Q2M3D2 409 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 TAF8Q7Z7C8 310 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 CNIH3Q8TBE1 160 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SFXN5Q8TD22 340 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 XAGE5Q8WWM1 108 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 FEVQ99581 238 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 TPSD1Q9BZJ3 242 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 SEMA3GQ9NS98 782 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ACER3Q9NUN7 267 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ANKMY1Q9P2S6 941 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ENTPD4Q9Y227 616 aa17.45■□□□□ 0.38
HOXC11-201ENST00000243082 ENTPD2Q9Y5L3 495 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms