RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IL10RBQ08334 325 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■□□□ 12.5
MSH2-201ENST00000233146 KCTD2Q14681 263 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OVOS1Q6IE37 1185 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 TMIGD1Q6UXZ0 262 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 CBLN2Q8IUK8 224 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OR10G2Q8NGC3 310 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 OR52E6Q96RD3 313 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 GMLQ99445 158 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 NFKBIZQ9BYH8 718 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 SAP130Q9H0E3 1048 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OSGEPL1Q9H4B0 414 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 MROH8Q9H579 483 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 RERGLQ9H628 205 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 ASB1Q9Y576 335 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 TERTO14746 1132 aaKnown RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 TREHO43280 583 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 POMCP01189 267 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PEPDP12955 493 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 SULT1E1P49888 294 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PGM5Q15124 567 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 SLC25A52Q3SY17 297 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 RNF212Q495C1 297 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PLK5Q496M5 336 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OTUD1Q5VV17 481 aaPredicted RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 PTCHD4Q6ZW05 846 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PGAP1Q75T13 922 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 ZNF687Q8N1G0 1237 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 C7orf31Q8N865 590 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 AGO3Q9H9G7 860 aaKnown RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 SERHLQ9NQF3 203 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
MSH2-201ENST00000233146 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
MSH2-201ENST00000233146 OR6C68A6NDL8 312 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ECI2O75521 394 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 RP2O75695 350 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 MYCLP12524 364 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 MUC1P15941 1255 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 MST1P26927 711 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PTPN6P29350 595 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SUOXP51687 545 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 RABGGTBP53611 331 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 MPPE1Q53F39 396 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 FAM109BQ6ICB4 259 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 LAS2Q8IYD9 372 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ZNF527Q8NB42 609 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 STAG3L4Q8TBR4 150 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 MOGAT1Q96PD6 335 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 CLMPQ9H6B4 373 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 OR6C2Q9NZP2 312 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 YARS2Q9Y2Z4 477 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 SNX11Q9Y5W9 270 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 MEX3AA1L020 520 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 YDJCA8MPS7 323 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 RAD1O60671 282 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ENTPD6O75354 484 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 DDX6P26196 483 aaKnown RBP eCLIP12.4□□□□□ -0.42
MSH2-201ENST00000233146 S100A11P31949 105 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ERVPABLB-1P60509 514 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 C1DQ13901 141 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 CAPSQ13938 189 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PTGES3Q15185 160 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 IL27RAQ6UWB1 636 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TRPV1Q8NER1 839 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 UBL7Q96S82 380 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 HBEGFQ99075 208 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PFDN5Q99471 154 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 DPY30Q9C005 99 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 ELAC1Q9H777 363 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 GPR31O00270 319 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TNFRSF11BO00300 401 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SLC19A2O60779 497 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ANXA9O76027 345 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 EGFP01133 1207 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 HPXP02790 462 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SPCS3P61009 180 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PITX1P78337 314 aaPredicted RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 DEFA6Q01524 100 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TCP10Q12799 353 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SLC14A1Q13336 389 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ALKBH1Q13686 389 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 UBXN2BQ14CS0 331 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 C9orf152Q5JTZ5 239 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PDE12Q6L8Q7 609 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 MZT2AQ6P582 158 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 PAQR6Q6TCH4 344 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TMEM17Q86X19 198 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms