RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RAB8BQ92930 207 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 EHD3Q9NZN3 535 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 DNAJC27Q9NZQ0 273 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 WBP11Q9Y2W2 641 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 HMGN4O00479 90 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CTDSP2O14595 271 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 OR10H3O60404 316 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 MMP20O60882 483 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CSO75390 466 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 CYP17A1P05093 508 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 H1F0P07305 194 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 ITGB8P26012 769 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 FRKP42685 505 aaPredicted RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 PCBP4P57723 403 aaKnown RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 DEFA1P59665 94 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 DEFA3P59666 94 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 HSPB3Q12988 150 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CAMK2BQ13554 666 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 LRIT3Q3SXY7 679 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 TCEAL5Q5H9L2 206 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CCBE1Q6UXH8 406 aaPredicted RBP15.45■□□□□ 0.06
LTBR-201ENST00000228918 C6orf120Q7Z4R8 191 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 DCUN1D3Q8IWE4 304 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 OR4D11Q8NGI4 311 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 KLHL6Q8WZ60 621 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 SLC6A18Q96N87 628 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 F2RL3Q96RI0 385 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 KCNS3Q9BQ31 491 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 C5AR2Q9P296 337 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 TAC3Q9UHF0 121 aa15.45■□□□□ 0.06
LTBR-201ENST00000228918 CAPN5O15484 640 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 LZTS3O60299 673 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 ERGP11308 486 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 SOX3P41225 446 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 KCNJ5P48544 419 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 XKP51811 444 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 IFITM2Q01629 132 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 HEPACAMQ14CZ8 416 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 PLPP4Q5VZY2 271 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 PGBD2Q6P3X8 592 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 DEF8Q6ZN54 512 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 WDR53Q7Z5U6 358 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 C17orf64Q86WR6 236 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 RBM45Q8IUH3 476 aaKnown RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 VANGL1Q8TAA9 524 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 CHAC2Q8WUX2 184 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 TMEM80Q96HE8 168 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 ZNF354BQ96LW1 612 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 NRTNQ99748 197 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 CCDC32Q9BV29 185 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 PELI2Q9HAT8 420 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 SMURF1Q9HCE7 757 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 CRNNQ9UBG3 495 aaPredicted RBP15.44■□□□□ 0.06
LTBR-201ENST00000228918 CLEC2DQ9UHP7 191 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 ACAD8Q9UKU7 415 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 PRKAB1Q9Y478 270 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 IRAK3Q9Y616 596 aa15.44■□□□□ 0.06
LTBR-201ENST00000228918 ANHXE9PGG2 379 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CACNB4O00305 520 aaPredicted RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 SLC9A3R1O14745 358 aaPredicted RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 NDUFB5O43674 189 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 VEGFDO43915 354 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 EFCAB14O75071 495 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CLTBP09497 229 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ADH5P11766 374 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CKMT1AP12532 417 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CD72P21854 359 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CNTN1Q12860 1018 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 LAMA3Q16787 3333 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SPDYE7PQ495Y7 208 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 C1orf53Q5VUE5 145 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SMPDL3AQ92484 453 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 NXPE3Q969Y0 559 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 WFDC6Q9BQY6 131 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SLC30A2Q9BRI3 323 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 FUZQ9BT04 418 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 RACGAP1Q9H0H5 632 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SERHL2Q9H4I8 314 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 C3orf14Q9HBI5 128 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 EXOSC4Q9NPD3 245 aaKnown RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 DYRK4Q9NR20 520 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SEMA3GQ9NS98 782 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 MUC22E2RYF6 1773 aaPredicted RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 PDZK1P1A8MUH7 402 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 H3BN98 237 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ASNA1O43681 348 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ACRP10323 421 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CCL5P13501 91 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ADRB3P13945 408 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CASP3P42574 277 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 ZNF91Q05481 1191 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 MESP2Q0VG99 397 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 NCF4Q15080 339 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 SPHARQ15513 63 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 CASP12Q6UXS9 341 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 MMAAQ8IVH4 418 aaKnown RBP15.43■□□□□ 0.06
LTBR-201ENST00000228918 SLC34A3Q8N130 599 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 TMIEQ8NEW7 156 aa15.43■□□□□ 0.06
LTBR-201ENST00000228918 OR8J1Q8NGP2 316 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms