RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PLEKHA6Q9Y2H5 1048 aa17.63■□□□□ 0.41
CLIP2-201ENST00000223398 DRD2P14416 443 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 FOLR3P41439 243 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 KCNC4Q03721 635 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 ERI1Q8IV48 349 aaKnown RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 MED28Q9H204 178 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 KCNJ13O60928 360 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 RDH16O75452 317 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 HBQ1P09105 142 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 SOX2P48431 317 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 HTR6P50406 440 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 ARSFP54793 590 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 MEP1AQ16819 746 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 ULK3Q6PHR2 472 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 FIP1L1Q6UN15 594 aaKnown RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 FRMD6Q96NE9 622 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 CCNL2Q96S94 520 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 PTRH2Q9Y3E5 179 aaKnown RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 DNMT3AQ9Y6K1 912 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 E7ESA3 106 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 COMMD6Q7Z4G1 85 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 OR2L8Q8NGY9 312 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 SEC14L1Q92503 715 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 MND1Q9BWT6 205 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 HSPA12AO43301 675 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 RAB36O95755 333 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 PVRP15151 417 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 GRPRP30550 384 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 NAA10P41227 235 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-201ENST00000223398 TAS2R38P59533 333 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 C16orf78Q8WTQ4 265 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 SLC12A9Q9BXP2 914 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 CHIAQ9BZP6 476 aa17.62■□□□□ 0.41
CLIP2-201ENST00000223398 DRGXA6NNA5 263 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 CTSCP53634 463 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 GALK2Q01415 458 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 FGL2Q14314 439 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 RABEPKQ7Z6M1 372 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 BOLLQ8N9W6 283 aaKnown RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ALOXE3Q9BYJ1 711 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 TMEM185BQ9H7F4 350 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 SH3BGRL2Q9UJC5 107 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PRSS38A1L453 326 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PROM1O43490 865 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 RPS3AP61247 264 aaKnown RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 TMEM151BQ8IW70 566 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 DTD2Q96FN9 168 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 FBXL20Q96IG2 436 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF317Q96PQ6 595 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 MAP3K3Q99759 626 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 STOML2Q9UJZ1 356 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ANHXE9PGG2 379 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ACOT7O00154 380 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 SCAMP2O15127 329 aaKnown RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 MANEALQ5VSG8 457 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 OR52E1Q8NGJ3 308 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 UBAP1Q9NZ09 502 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 MGAT4BQ9UQ53 548 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 RPH3AQ9Y2J0 694 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 SMAD9O15198 467 aaKnown RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ATP4BP51164 291 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ERVPABLB-1P60509 514 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 SH3BP2P78314 561 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 CTBSQ01459 385 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 RPA4Q13156 261 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PAMR1Q6UXH9 720 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PIANPQ8IYJ0 282 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 APIPQ96GX9 242 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 TOR3AQ9H497 397 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 LRIT1Q9P2V4 623 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PEPDP12955 493 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF16P17020 682 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 HOXD9P28356 352 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 RGRP47804 291 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 VMACQ2NL98 169 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-201ENST00000223398 PISDQ9UG56 409 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 LIPT1Q9Y234 373 aa17.61■□□□□ 0.41
CLIP2-201ENST00000223398 HTR3EA5X5Y0 456 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 VSTM2BA6NLU5 285 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ACOX3O15254 700 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 TUBB3Q13509 450 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 GAS6Q14393 721 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 EXOC3L2Q2M3D2 409 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ISCA2Q86U28 154 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 RELL1Q8IUW5 271 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 PRAMEF33A0A0G2JMD5 474 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 UNC119BA6NIH7 251 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 PRAMEF10O60809 474 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 NPPAP01160 153 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 PITPNAQ00169 270 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 RHDQ02161 417 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 AKAP14Q86UN6 197 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 SORBS1Q9BX66 1292 aaKnown RBP17.6■□□□□ 0.41
CLIP2-201ENST00000223398 AIG1Q9NVV5 245 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 GPRC5BQ9NZH0 403 aa17.6■□□□□ 0.41
CLIP2-201ENST00000223398 ZNF639Q9UID6 485 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms