RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 RIN1Q13671 783 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ZNF77Q15935 545 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 UNC5DQ6UXZ4 953 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 DUSP18Q8NEJ0 188 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ENKURQ8TC29 256 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 SUN5Q8TC36 379 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 HCAR2Q8TDS4 363 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 UCK2Q9BZX2 261 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 C11orf54Q9H0W9 315 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 REEP4Q9H6H4 257 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ANKRA2Q9H9E1 313 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 NMNAT1Q9HAN9 279 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 SNTG1Q9NSN8 517 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 GULP1Q9UBP9 304 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 FCF1Q9Y324 198 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PPIL1Q9Y3C6 166 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ZNF780AO75290 641 aaPredicted RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 CYP17A1P05093 508 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ADRA2AP08913 450 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PPP3R1P63098 170 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 ALDH6A1Q02252 535 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PDE7AQ13946 482 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 SUZ12Q15022 739 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 XKR6Q5GH73 641 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 TPRG1Q6ZUI0 275 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PHC2Q8IXK0 858 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 OR52J3Q8NH60 311 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 FIBINQ8TAL6 211 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 LINC00597Q9H2U6 94 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 MRPL39Q9NYK5 338 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 NUFIP1Q9UHK0 495 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 DIMT1Q9UNQ2 313 aaKnown RBP15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PCDHGB7Q9Y5F8 929 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 DENND4CQ5VZ89 1909 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 DOCK6Q96HP0 2047 aa15.16■□□□□ 0.02
SF3A2-201ENST00000221494 PRAMEF25A6NGN4 478 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 PCDH17O14917 1159 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ENTPD6O75354 484 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 AP2A2O94973 939 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 IGSF6O95976 241 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GSTM1P09488 218 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 C1SP09871 688 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SERPINA4P29622 427 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SMIM11AP58511 58 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 B4GALNT1Q00973 533 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GPR19Q15760 415 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SAXO2Q658L1 398 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 PLET1Q6UQ28 207 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 APCDD1Q8J025 514 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 TAGAPQ8N103 731 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SLC34A3Q8N130 599 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 FAM109AQ8N4B1 249 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 PLA2G15Q8NCC3 412 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ELMO1Q92556 727 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 LMLNQ96KR4 655 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 TEFMQ96QE5 360 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 P2RY13Q9BPV8 354 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SLC35A5Q9BS91 424 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 POLR2J2Q9GZM3 115 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MIXL1Q9H2W2 232 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 PLSCR3Q9NRY6 295 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GPATCH2Q9NW75 528 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 FAAHO00519 579 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MYL12BO14950 172 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SGTAO43765 313 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GPR37L1O60883 481 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 CYP7B1O75881 506 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ETFAP13804 333 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 CD22P20273 847 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ITPKAP23677 461 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SDC2P34741 201 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MAP2K3P46734 347 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ZNF763Q0D2J5 394 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 LMAN2Q12907 356 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 DOC2AQ14183 400 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ZNF628Q5EBL2 1059 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ZMAT1Q5H9K5 638 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 KIAA1211LQ6NV74 962 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 THOC6Q86W42 341 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GPR26Q8NDV2 337 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 NFKBIDQ8NI38 313 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 GTPBP3Q969Y2 492 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 LRRC3BQ96PB8 259 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 NOTCH4Q99466 2003 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 CDCA3Q99618 268 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MKRN2Q9H000 416 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 MMP28Q9H239 520 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 SFXN1Q9H9B4 322 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ABCB9Q9NP78 766 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 TIGARQ9NQ88 270 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 TXNL4BQ9NX01 149 aaKnown RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 REV1Q9UBZ9 1251 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 RAB23Q9ULC3 237 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 KIF26AQ9ULI4 1882 aaPredicted RBP15.15■□□□□ 0.02
SF3A2-201ENST00000221494 ASB4Q9Y574 426 aa15.15■□□□□ 0.02
SF3A2-201ENST00000221494 A8MV72 311 aaPredicted RBP15.14■□□□□ 0.01
SF3A2-201ENST00000221494 ERVH48-1M5A8F1 160 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms