RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TTC9BQ8N6N2 239 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 PRR11Q96HE9 360 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 PGAM5Q96HS1 289 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 IRF2BPLQ9H1B7 796 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 MARCH4Q9P2E8 410 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 FTCDNL1E5RQL4 147 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ARSAP15289 507 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 FOLR3P41439 243 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 PXNP49023 591 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 Q6ZSR6 202 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 KRTCAP2Q8N6L1 136 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ABHD5Q8WTS1 349 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 C1orf21Q9H246 121 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 LATO43561 262 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DPP6P42658 865 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 MLC1Q15049 377 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 SLC25A25Q6KCM7 469 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 NANOGP8Q6NSW7 305 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 RTL10Q7L3V2 364 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DNAAF1Q8NEP3 725 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ACVR1CQ8NER5 493 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 APOOQ9BUR5 198 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 NANOGQ9H9S0 305 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ANKMY1Q9P2S6 941 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DNAJC25-GNG10A0A024R161 153 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 MBLAC1A4D2B0 266 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ERCC1P07992 297 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 BEND4Q6ZU67 534 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 AURKBQ96GD4 344 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 HCFC1R1Q9NWW0 138 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 SPEF2Q9C093 1822 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DISC1C4P0D8 188 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 RNF144AP50876 292 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 HSD11B2P80365 405 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 SLC10A2Q12908 348 aaPredicted RBP18.12■□□□□ 0.49
SMPD3-201ENST00000219334 GRIK2Q13002 908 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 VMACQ2NL98 169 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 FIGNL1Q6PIW4 674 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 LRRTM3Q86VH5 581 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 PSD4Q8NDX1 1056 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DNAJA3Q96EY1 480 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 FAM129BQ96TA1 746 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 MAP3K3Q99759 626 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 DOHHQ9BU89 302 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 CRB3Q9BUF7 120 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 TTTY10Q9BZA0 68 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 HOXD1Q9GZZ0 328 aa18.12■□□□□ 0.49
SMPD3-201ENST00000219334 ANKRD26Q9UPS8 1709 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 GJE1A6NN92 205 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 CDRT1O95170 752 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 ADAM15Q13444 863 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 ABRAXAS2Q15018 415 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 WSCD2Q2TBF2 565 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 DEFB110Q30KQ9 67 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 GALNT10Q86SR1 603 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 FOXRED2Q8IWF2 684 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 FLRT2O43155 660 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 BPNT1O95861 308 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 MRPL3P09001 348 aaKnown RBP18.11■□□□□ 0.49
SMPD3-201ENST00000219334 PRKCAP17252 672 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 SOX2P48431 317 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 ACADVLP49748 655 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 NKAPLQ5M9Q1 402 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 SSX6Q7RTT6 188 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 OR8K3Q8NH51 312 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 SLC6A15Q9H2J7 730 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 TMA7Q9Y2S6 64 aaKnown RBP18.11■□□□□ 0.49
SMPD3-201ENST00000219334 CLCA4Q14CN2 919 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 RBM12BQ8IXT5 1001 aaKnown RBP18.11■□□□□ 0.49
SMPD3-201ENST00000219334 FGF13Q92913 245 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 CCDC120Q96HB5 630 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 AIFM2Q9BRQ8 373 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 OR10A4Q9H209 315 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 EIF3FO00303 357 aaPredicted RBP18.11■□□□□ 0.49
SMPD3-201ENST00000219334 MLLT10P55197 1068 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 SRYQ05066 204 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 CRYZQ08257 329 aaKnown RBP18.11■□□□□ 0.49
SMPD3-201ENST00000219334 DEFB133Q30KQ1 61 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 HLA-CQ95604 372 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 TOX2Q96NM4 488 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 PCDHGA6Q9Y5G7 932 aa18.11■□□□□ 0.49
SMPD3-201ENST00000219334 KANTRA0A1W2PQU2 76 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 AP2S1P53680 142 aaPredicted RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 TAS2R38P59533 333 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 SERTAD2Q14140 314 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 NR0B2Q15466 257 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 BTBD16Q32M84 506 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 HNRNPA1L2Q32P51 320 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 UNC50Q53HI1 259 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 GALNT15Q8N3T1 639 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 OR2L2Q8NH16 312 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 DOK4Q8TEW6 326 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 KCNN1Q92952 543 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 BARD1Q99728 777 aaKnown RBP18.1■□□□□ 0.49
SMPD3-201ENST00000219334 FN3KQ9H479 309 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 NANSQ9NR45 359 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 LOC100509620A0A075B734 347 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 hCG_1807616A0A1W2PRN6 198 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 ATE1O95260 518 aa18.1■□□□□ 0.49
SMPD3-201ENST00000219334 FDXRP22570 491 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms