RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 C18orf63Q68DL7 685 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 LAIR2Q6ISS4 152 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 TTC29Q8NA56 475 aaPredicted RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 GIPC3Q8TF64 312 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 RAB8BQ92930 207 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 ROGDIQ9GZN7 287 aa28.07■■■□□ 2.08
PABPN1-201ENST00000216727 ZCCHC3Q9NUD5 404 aaKnown RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 NDRG4Q9ULP0 352 aaKnown RBP28.07■■■□□ 2.08
PABPN1-201ENST00000216727 THEGLP0DJG4 465 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 BTN3A2P78410 334 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 FZD2Q14332 565 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 SKIV2LQ15477 1246 aaKnown RBP28.06■■■□□ 2.08
PABPN1-201ENST00000216727 BROXQ5VW32 411 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 FCRL6Q6DN72 434 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 BHLHB9Q6PI77 547 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 FIGLAQ6QHK4 219 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 KCTD8Q6ZWB6 473 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 UTP15Q8TED0 518 aaKnown RBP28.06■■■□□ 2.08
PABPN1-201ENST00000216727 MOAP1Q96BY2 351 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 EXD2Q9NVH0 621 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 PILRAQ9UKJ1 303 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 SH3GLB1Q9Y371 365 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 ENPP4Q9Y6X5 453 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 GSAPA4D1B5 854 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 ENO4A6NNW6 628 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 E9PQ18 207 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 MFN2O95140 757 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 EEF1B2P24534 225 aaKnown RBP28.06■■■□□ 2.08
PABPN1-201ENST00000216727 IL1RL1Q01638 556 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 SIM2Q14190 667 aaPredicted RBP28.06■■■□□ 2.08
PABPN1-201ENST00000216727 DUSP7Q16829 419 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 OR10G6Q8NH81 332 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 APOBEC4Q8WW27 367 aaKnown RBP28.06■■■□□ 2.08
PABPN1-201ENST00000216727 PATE1Q8WXA2 126 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF566Q969W8 418 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 PIP5K1AQ99755 562 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 P2RX2Q9UBL9 471 aa28.06■■■□□ 2.08
PABPN1-201ENST00000216727 A0A1W2PPC4 97 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 TMEM247A6NEH6 219 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 A8MVJ9 347 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 CTSVO60911 334 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 RECKO95980 971 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 SMIM10L1P0DMW3 83 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 CSNK2A2P19784 350 aaPredicted RBP28.05■■■□□ 2.08
PABPN1-201ENST00000216727 CD247P20963 164 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 HMGA2P52926 109 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 SPIBQ01892 262 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 RPS26P11Q5JNZ5 115 aaPredicted RBP28.05■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF605Q86T29 641 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 FAM174AQ8TBP5 190 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 ZFAND2BQ8WV99 257 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 SMIM10Q96HG1 83 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 MAPKAP1Q9BPZ7 522 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 GABARAPL3Q9BY60 117 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 OR51I1Q9H343 314 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 POLR1BQ9H9Y6 1135 aa28.05■■■□□ 2.08
PABPN1-201ENST00000216727 CPNE6O95741 557 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 CCDC159P0C7I6 412 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF888P0CJ79 500 aaPredicted RBP28.04■■■□□ 2.08
PABPN1-201ENST00000216727 RHCEP18577 417 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 CDK5R2Q13319 367 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 LSAMPQ13449 338 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 APOL4Q9BPW4 351 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 TUBA1CQ9BQE3 449 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 VCX3AQ9NNX9 186 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 GIMAP4Q9NUV9 329 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 FAM32AQ9Y421 112 aaKnown RBP28.04■■■□□ 2.08
PABPN1-201ENST00000216727 GMPPBQ9Y5P6 360 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 C2orf74A8MZ97 194 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 AXIN1O15169 862 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 ABCB7O75027 752 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 IFNW1P05000 195 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 TSPYL5Q86VY4 417 aaPredicted RBP28.04■■■□□ 2.08
PABPN1-201ENST00000216727 CCDC116Q8IYX3 515 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 TSTD1Q8NFU3 115 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 RASSF5Q8WWW0 418 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF607Q96SK3 696 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 PITX2Q99697 317 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 ORAI3Q9BRQ5 295 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 C2orf42Q9NWW7 574 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 PSME2Q9UL46 239 aa28.04■■■□□ 2.08
PABPN1-201ENST00000216727 URADA6NGE7 173 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 ZNF701M0R085 212 aaPredicted RBP28.03■■■□□ 2.08
PABPN1-201ENST00000216727 OR12D1P0DN82 309 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 CYP4B1P13584 511 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 ANXA8P13928 327 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 JUNBP17275 347 aaPredicted RBP28.03■■■□□ 2.08
PABPN1-201ENST00000216727 MATN1P21941 496 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 MPIP34949 423 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 LIMS1P48059 325 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 KHKP50053 298 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 ANXA11P50995 505 aaKnown RBP28.03■■■□□ 2.08
PABPN1-201ENST00000216727 CDH12P55289 794 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 IL5RAQ01344 420 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 NPRL3Q12980 569 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 PMS2P3Q13401 168 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 SUZ12Q15022 739 aaKnown RBP28.03■■■□□ 2.08
PABPN1-201ENST00000216727 MICAQ29983 383 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 CYP27C1Q4G0S4 372 aa28.03■■■□□ 2.08
PABPN1-201ENST00000216727 SLC44A2Q8IWA5 706 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms