RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 IDH3GP51553 393 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 AVPI1Q5T686 147 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 VITQ6UXI7 678 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CREB3L2Q70SY1 520 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 LRRC70Q7Z2Q7 622 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 ZNF584Q8IVC4 421 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 KIAA1191Q96A73 305 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FKBP10Q96AY3 582 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC30A3Q99726 388 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CTRCQ99895 268 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 DERL2Q9GZP9 239 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 SLC32A1Q9H598 525 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 AIG1Q9NVV5 245 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CD84Q9UIB8 345 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 RNF11Q9Y3C5 154 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 PCDHGA6Q9Y5G7 932 aa10.03□□□□□ -0.8
VCL-201ENST00000211998 CCDC85CA6NKD9 419 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 WASH3PC4AMC7 463 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 CTDSP2O14595 271 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 HSPA12AO43301 675 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 SLC22A5O76082 557 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 JUPP14923 745 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 PTH2RP49190 550 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 HK3P52790 923 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 GALNT1Q10472 559 aaPredicted RBP10.02□□□□□ -0.8
VCL-201ENST00000211998 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 GRAMD2AQ8IUY3 354 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 HS3ST5Q8IZT8 346 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 DNAJC5GQ8N7S2 189 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 GNPDA2Q8TDQ7 276 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 RBM18Q96H35 190 aaKnown RBP10.02□□□□□ -0.8
VCL-201ENST00000211998 FEVQ99581 238 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 C17orf62Q9BQA9 187 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 THAP7Q9BT49 309 aaPredicted RBP10.02□□□□□ -0.8
VCL-201ENST00000211998 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.8
VCL-201ENST00000211998 COPS7AQ9UBW8 275 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 ZNF223Q9UK11 482 aaPredicted RBP10.02□□□□□ -0.8
VCL-201ENST00000211998 CBY1Q9Y3M2 126 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 PCDHGB2Q9Y5G2 931 aa10.02□□□□□ -0.8
VCL-201ENST00000211998 A0A1B0GVT2 93 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 HAS3O00219 553 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 B3GALT2O43825 422 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 AHCYP23526 432 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 GJA5P36382 358 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 ZNF169Q14929 603 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 CARD16Q5EG05 197 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 GDPGP1Q6ZNW5 385 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 KRTCAP2Q8N6L1 136 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 KCTD13Q8WZ19 329 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 CD180Q99467 661 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 IL12RB2Q99665 862 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 TMEM175Q9BSA9 504 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 CCM2Q9BSQ5 444 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 MYNNQ9NPC7 610 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 UFSP2Q9NUQ7 469 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 ZNF226Q9NYT6 803 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 GPR89AB7ZAQ6 455 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 WNT9AO14904 365 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 LRRTM2O43300 516 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 TP53P04637 393 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 GPR89BP0CG08 455 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 ACVR1BP36896 505 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 DLSTP36957 453 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 ETV3P41162 512 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 NRIP1P48552 1158 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 AGTR2P50052 363 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 KCNC4Q03721 635 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 SIX1Q15475 284 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 SLC27A4Q6P1M0 643 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 NATD1Q8N6N6 113 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 C2CD4AQ8NCU7 369 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 PAQR8Q8TEZ7 354 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 NR4A3Q92570 626 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 PSKH2Q96QS6 385 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 P2RY13Q9BPV8 354 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 ATG5Q9H1Y0 275 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 SRMSQ9H3Y6 488 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 CYP8B1Q9UNU6 501 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 TIMM8BQ9Y5J9 83 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 PRAF2O60831 178 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 TGFB1P01137 390 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 RAB3AP20336 220 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 SOX3P41225 446 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 SPIN4Q56A73 249 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 RNF130Q86XS8 419 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 C7orf61Q8IZ16 206 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 COX18Q8N8Q8 333 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 SLC22A18Q96BI1 424 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 LIN37Q96GY3 246 aaPredicted RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 LRR1Q96L50 414 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 PELOQ9BRX2 385 aaKnown RBP10.02□□□□□ -0.81
VCL-201ENST00000211998 NT5DC2Q9H857 520 aa10.02□□□□□ -0.81
VCL-201ENST00000211998 NDUFS1P28331 727 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 DCTP40126 519 aa10.01□□□□□ -0.81
VCL-201ENST00000211998 RASGEF1BQ0VAM2 473 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms