RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 C19orf12Q9NSK7 152 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 LRRTM2O43300 516 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 FAPQ12884 760 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 Q8N9G6 341 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 LMX1AQ8TE12 382 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 LGALS12Q96DT0 336 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 RXFP3Q9NSD7 469 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 PRODH2Q9UF12 536 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 TMEM14AQ9Y6G1 99 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF705FA8MVS1 300 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 POLR1CO15160 346 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF705DP0CH99 300 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF705BP0CI00 300 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 PRKCAP17252 672 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 CLCN2P51788 898 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 PXKQ7Z7A4 578 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 CLDN19Q8N6F1 224 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 WDR20Q8TBZ3 569 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 OR14A2Q96R54 314 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 SOX17Q9H6I2 414 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF442Q9H7R0 627 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 TUBG2Q9NRH3 451 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 YIPF1Q9Y548 306 aa16.49■□□□□ 0.23
ITGB4-201ENST00000200181 DNMT3AQ9Y6K1 912 aaPredicted RBP16.49■□□□□ 0.23
ITGB4-201ENST00000200181 KDELR3O43731 214 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 AKR1C8PQ5T2L2 129 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 BORAQ6PGQ7 559 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 HOXB13Q92826 284 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 HYLS1Q96M11 299 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 POPDC3Q9HBV1 291 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TMEM45AQ9NWC5 275 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 RFPL2O75678 378 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 GDI1P31150 447 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 GABRA3P34903 492 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 ART1P52961 327 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF674Q2M3X9 581 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 PRRT3Q5FWE3 981 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TRAM1L1Q8N609 369 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 CPT1CQ8TCG5 803 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 BIN3Q9NQY0 253 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 F8W036 122 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 HCRTR2O43614 444 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 RORAP35398 523 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 HNRNPKP61978 463 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 BLOC1S1P78537 153 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 MSS51Q4VC12 460 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 FAM205BPQ63HN1 556 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 FNDC8Q8TC99 324 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 MGLLQ99685 303 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 FZD8Q9H461 694 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 FBXL12Q9NXK8 326 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 ARVCFO00192 962 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 INPPL1O15357 1258 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 PYCR1P32322 319 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 GSCP56915 257 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 PPP1R3AQ16821 1122 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF776Q68DI1 518 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 LRFN4Q6PJG9 635 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TMPPEQ6ZT21 453 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TOR1AIP2Q8NFQ8 470 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 TRUB1Q8WWH5 349 aaKnown RBP16.48■□□□□ 0.23
ITGB4-201ENST00000200181 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 DNTTIP1Q9H147 329 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 GMEB2Q9UKD1 530 aa16.48■□□□□ 0.23
ITGB4-201ENST00000200181 SOCS2O14508 198 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 ATG12O94817 140 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 MAS1P04201 325 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RAB4AP20338 218 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 GRPRP30550 384 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 LEPRP48357 1165 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 SOX9P48436 509 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 AGTR2P50052 363 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RIDAP52758 137 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 SNU13P55769 128 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 MEF2AQ02078 507 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 OLIG2Q13516 323 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RAB11BQ15907 218 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 KANK2Q63ZY3 851 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 TXNRD3NBQ6F5E7 133 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CNTNAP3BQ96NU0 1288 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 PRTFDC1Q9NRG1 225 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 ASF1BQ9NVP2 202 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CSTAP01040 98 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 IDH3GP51553 393 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 NKX6-1P78426 367 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 PAFAH1B3Q15102 231 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 SFRP4Q6FHJ7 346 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CCDC116Q8IYX3 515 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 LILRB2Q8N423 598 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 OR6C74A6NCV1 312 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms