RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 MS4A12Q9NXJ0 267 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 CES1P1Q9UKY3 287 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 THADAQ6YHU6 1953 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 SCN3AQ9NY46 2000 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 GLOD5A6NK44 160 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 MYO1GB0I1T2 1018 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 PGRMC2O15173 223 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 B3GALT2O43825 422 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 ERAL1O75616 437 aaKnown RBP15.55■□□□□ 0.08
PHGDH-216ENST00000641375 NR2F6P10588 404 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 CDH3P22223 829 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 MPIP34949 423 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 CAPZBP47756 277 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 CCT3P49368 545 aaKnown RBP15.55■□□□□ 0.08
PHGDH-216ENST00000641375 NCBP2P52298 156 aaKnown RBP eCLIP15.55■□□□□ 0.08
PHGDH-216ENST00000641375 CASP9P55211 416 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 DSTNP60981 165 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 C18orf63Q68DL7 685 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 ZNF438Q7Z4V0 828 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 ZDHHC13Q8IUH4 622 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 ZDHHC21Q8IVQ6 265 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 SVOPLQ8N434 492 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 TMBIM1Q969X1 311 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 SDCCAG3Q96C92 435 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 PRDM9Q9NQV7 894 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 SEMA3GQ9NS98 782 aa15.55■□□□□ 0.08
PHGDH-216ENST00000641375 UPK1AO00322 258 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 SUV39H1O43463 412 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 PRKRAO75569 313 aaKnown RBP15.54■□□□□ 0.08
PHGDH-216ENST00000641375 EIF2S1P05198 315 aaKnown RBP15.54■□□□□ 0.08
PHGDH-216ENST00000641375 ARAFP10398 606 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 ALOX12P18054 663 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 GSTT1P30711 240 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 CDK9P50750 372 aaKnown RBP15.54■□□□□ 0.08
PHGDH-216ENST00000641375 PPP1CAP62136 330 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 CDK6Q00534 326 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 DEFB134Q4QY38 66 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 BHLHB9Q6PI77 547 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 OGFOD3Q6PK18 319 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 CEACAM20Q6UY09 585 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 CCDC80Q76M96 950 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 C6orf120Q7Z4R8 191 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 ZCCHC10Q8TBK6 192 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 CCDC3Q9BQI4 270 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 THUMPD1Q9NXG2 353 aaKnown RBP15.54■□□□□ 0.08
PHGDH-216ENST00000641375 BAG5Q9UL15 447 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 ANGPT4Q9Y264 503 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 ZNF780BQ9Y6R6 833 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 TMEM131Q92545 1883 aa15.54■□□□□ 0.08
PHGDH-216ENST00000641375 EI24O14681 340 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SH3BP5O60239 455 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 PIAS2O75928 621 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 IFNA14P01570 189 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 FABP3P05413 133 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 PROS1P07225 676 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CSNK2A2P19784 350 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TLX1P31314 330 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TNFRSF17Q02223 184 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 DMWDQ09019 674 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SPIDRQ14159 915 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CEBPEQ15744 281 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 DEFB133Q30KQ1 61 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 NHSL2Q5HYW2 709 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TMEM214Q6NUQ4 689 aaKnown RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TMEM64Q6YI46 380 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SAMD14Q8IZD0 417 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 C19orf47Q8N9M1 422 aaKnown RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 MOAP1Q96BY2 351 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CNRIP1Q96F85 164 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 HSH2DQ96JZ2 352 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 ERVMER34-1Q9H9K5 563 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SNX11Q9Y5W9 270 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 G3V2T6 193 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 PRAMEF10O60809 474 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SEMG1P04279 462 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 LYNP07948 512 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 UBTFL6P0CB48 400 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 ST6GAL1P15907 406 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CPN2P22792 545 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 AQP1P29972 269 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 RXRGP48443 463 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SELENOWP63302 87 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 EEF1A2Q05639 463 aaKnown RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 C14orf28Q4W4Y0 310 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CYBRD1Q53TN4 286 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 ZC3H12BQ5HYM0 836 aaKnown RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 GALNT10Q86SR1 603 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 ZC3H7AQ8IWR0 971 aaKnown RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CSNK1A1LQ8N752 337 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 OR10Q1Q8NGQ4 319 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 NFKBIDQ8NI38 313 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 SFXN5Q8TD22 340 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TBC1D20Q96BZ9 403 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CNBD2Q96M20 576 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 DOHHQ9BU89 302 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-216ENST00000641375 DAPP1Q9UN19 280 aa15.53■□□□□ 0.08
PHGDH-216ENST00000641375 CHN2P52757 468 aa15.52■□□□□ 0.08
PHGDH-216ENST00000641375 LIM2P55344 173 aa15.52■□□□□ 0.08
PHGDH-216ENST00000641375 ZXDAP98168 799 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms