RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ATG101Q9BSB4 218 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 RNF24Q9Y225 148 aa3.34□□□□□ -1.87
CCDC7-216ENST00000640058 LETM1O95202 739 aaPredicted RBP3.33□□□□□ -1.88
CCDC7-216ENST00000640058 SCG2P13521 617 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 HSD17B1P14061 328 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 FOSL2P15408 326 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 IFNAR1P17181 557 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 GDF1P27539 372 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 MEOX2P50222 304 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 RPL27P61353 136 aaKnown RBP3.33□□□□□ -1.88
CCDC7-216ENST00000640058 C14orf28Q4W4Y0 310 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 DMKNQ6E0U4 476 aaPredicted RBP3.33□□□□□ -1.88
CCDC7-216ENST00000640058 ABRAXAS1Q6UWZ7 409 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 ANKRD23Q86SG2 305 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 THNSL1Q8IYQ7 743 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 CCDC197Q8NCU1 140 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 OR1K1Q8NGR3 316 aa3.33□□□□□ -1.88
CCDC7-216ENST00000640058 MRPL24Q96A35 216 aaKnown RBP3.33□□□□□ -1.88
CCDC7-216ENST00000640058 TDRD6O60522 2096 aaKnown RBP3.32□□□□□ -1.88
CCDC7-216ENST00000640058 CCT8L1PA6NM43 557 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 M0R296 226 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 SIX3O95343 332 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-216ENST00000640058 PRB2P02812 416 aaPredicted RBP3.32□□□□□ -1.88
CCDC7-216ENST00000640058 FCGR3AP08637 254 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 CCDC159P0C7I6 412 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 TSPY3P0CV98 308 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 TSPY8P0CW00 308 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 LCP2Q13094 533 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 SCARB2Q14108 478 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 IQCCQ4KMZ1 466 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 DCLRE1AQ6PJP8 1040 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 C4orf19Q8IY42 314 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 UXS1Q8NBZ7 420 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 DNASE1L2Q92874 299 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 PCED1BQ96HM7 432 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 GBP5Q96PP8 586 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 TNMDQ9H2S6 317 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 ASB8Q9H765 288 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 MRPL17Q9NRX2 175 aaKnown RBP3.32□□□□□ -1.88
CCDC7-216ENST00000640058 PLSCR3Q9NRY6 295 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 VNN3Q9NY84 501 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 TAS2R16Q9NYV7 291 aa3.32□□□□□ -1.88
CCDC7-216ENST00000640058 YDJCA8MPS7 323 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 ODC1P11926 461 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 PPP2R1BP30154 601 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 GP5P40197 560 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 TNFRSF4P43489 277 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 KCNJ1P48048 391 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 FNTAP49354 379 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 CXCL6P80162 114 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 TSPY1Q01534 308 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 ODF2Q5BJF6 829 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 HERC4Q5GLZ8 1057 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-216ENST00000640058 HECTD3Q5T447 861 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 DCAF12Q5T6F0 453 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 CAPN13Q6MZZ7 669 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-216ENST00000640058 CAVIN1Q6NZI2 390 aaKnown RBP3.31□□□□□ -1.88
CCDC7-216ENST00000640058 GLRX5Q86SX6 157 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 CKAP2Q8WWK9 683 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 RAB3CQ96E17 227 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 C16orf58Q96GQ5 468 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 C17orf62Q9BQA9 187 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 IDI2Q9BXS1 227 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 CUEDC2Q9H467 287 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 ELL3Q9HB65 397 aaPredicted RBP3.31□□□□□ -1.88
CCDC7-216ENST00000640058 AMBNQ9NP70 447 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 GPR173Q9NS66 373 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 ABCC13Q9NSE7 274 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 EIF3KQ9UBQ5 218 aaKnown RBP3.31□□□□□ -1.88
CCDC7-216ENST00000640058 GPR132Q9UNW8 380 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 OR1A2Q9Y585 309 aa3.31□□□□□ -1.88
CCDC7-216ENST00000640058 TRAV34A0A0B4J273 112 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 KIAA0513O60268 411 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 TBCAO75347 108 aaKnown RBP3.3□□□□□ -1.88
CCDC7-216ENST00000640058 ANXA9O76027 345 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 P4HA1P13674 534 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 CD1EP15812 388 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 CCND3P30281 292 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-216ENST00000640058 SOAT1P35610 550 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 MAGEA9P43362 315 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 SLC25A1P53007 311 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 KRT83P78385 493 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 RBP5P82980 135 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 AKAP17AQ02040 695 aaKnown RBP3.3□□□□□ -1.88
CCDC7-216ENST00000640058 SLC3A1Q07837 685 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 EMC2Q15006 297 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 PPP1R3AQ16821 1122 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 C9orf129Q5T035 196 aaKnown RBP3.3□□□□□ -1.88
CCDC7-216ENST00000640058 WDR25Q64LD2 544 aaPredicted RBP3.3□□□□□ -1.88
CCDC7-216ENST00000640058 PODNL1Q6PEZ8 512 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 GALNTL5Q7Z4T8 443 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 ICA1LQ8NDH6 482 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 TCP11Q8WWU5 503 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 ADPGKQ9BRR6 497 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 DPEP3Q9H4B8 488 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 PLEK2Q9NYT0 353 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 POMT1Q9Y6A1 747 aa3.3□□□□□ -1.88
CCDC7-216ENST00000640058 GTPBP10A4D1E9 387 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms