RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CST5P28325 142 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ARRB2P32121 409 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 TM4SF4P48230 202 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 VSX2P58304 361 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 DCDC1P59894 354 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 RUNX3Q13761 415 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 TUBA3EQ6PEY2 450 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR2T11Q8NH01 316 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 WACQ9BTA9 647 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 Q9N2J8 555 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 KIAA1551Q9HCM1 1747 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GABRR3A8MPY1 467 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 NUAK1O60285 661 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 HOXC13P31276 330 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SHMT2P34897 504 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 BNC1Q01954 994 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 PIN1Q13526 163 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ODF4Q2M2E3 257 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 RPS26P11Q5JNZ5 115 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 MPP7Q5T2T1 576 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 PHOSPHO1Q8TCT1 267 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ASB11Q8WXH4 323 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 EFHD2Q96C19 240 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SH3YL1Q96HL8 342 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 CNDP2Q96KP4 475 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ENPP4Q9Y6X5 453 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SH3PXD2BA1X283 911 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 ACOT8O14734 319 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 FAUP35544 74 aaKnown RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 CLCN2P51788 898 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR12D2P58182 307 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 CAMK1Q14012 370 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 PON3Q15166 354 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 CST6Q15828 149 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 RSPO2Q6UXX9 243 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SH2D5Q6ZV89 423 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SLC15A4Q8N697 577 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 GATSQ8NAP1 163 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR4K5Q8NGD3 323 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 TEX37Q96LM6 180 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 IL21RQ9HBE5 538 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 PHF24Q9UPV7 400 aa13.78□□□□□ -0.2
SCARB2-216ENST00000639300 H3BMQ9 156 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 I6L893 689 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-216ENST00000639300 PLOD2O00469 737 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 KIAA0513O60268 411 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 BCAS1O75363 584 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-216ENST00000639300 AOAHP28039 575 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 FAM217AQ8IXS0 508 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 KLHDC8AQ8IYD2 350 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 DTX3Q8N9I9 347 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 COG8Q96MW5 612 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 MCCC1Q96RQ3 725 aaPredicted RBP13.77□□□□□ -0.2
SCARB2-216ENST00000639300 SECISBP2Q96T21 854 aaKnown RBP13.77□□□□□ -0.2
SCARB2-216ENST00000639300 SLC35C2Q9NQQ7 365 aa13.77□□□□□ -0.2
SCARB2-216ENST00000639300 A8MV72 311 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 PROM1O43490 865 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 IFNA6P05013 189 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 MANEALQ5VSG8 457 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 GALNT7Q86SF2 657 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF480Q8WV37 535 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 ECHDC3Q96DC8 303 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 NDC1Q9BTX1 674 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 CHIAQ9BZP6 476 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 RDH14Q9HBH5 336 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 OR6C74A6NCV1 312 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 RNGTTO60942 597 aaKnown RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 MTHFD2P13995 350 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 TIMP2P16035 220 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 GABRA3P34903 492 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 RAB28P51157 221 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 ARFIP1P53367 373 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 TUBB3Q13509 450 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 NDUFAF5Q5TEU4 345 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 PEG10Q86TG7 708 aaKnown RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 NRROSQ86YC3 692 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 TMEM102Q8N9M5 508 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.77□□□□□ -0.215e-8■■■■□ 23.5
SCARB2-216ENST00000639300 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 FAM210AQ96ND0 272 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 TAPBPLQ9BX59 468 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 TUBB1Q9H4B7 451 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 CENPMQ9NSP4 180 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 HEMK1Q9Y5R4 338 aaPredicted RBP13.77□□□□□ -0.21
SCARB2-216ENST00000639300 SEC16AO15027 2179 aa13.77□□□□□ -0.21
SCARB2-216ENST00000639300 FAAHO00519 579 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms