RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 POU4F1Q01851 419 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 KLF1Q13351 362 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RAB31Q13636 194 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SBK1Q52WX2 424 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DMRTA1Q5VZB9 504 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DOK6Q6PKX4 331 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 G2E3Q7L622 706 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MRPL52Q86TS9 123 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 LDHDQ86WU2 507 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SCML4Q8N228 414 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MRPL50Q8N5N7 158 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PCDH19Q8TAB3 1148 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 EGFL8Q99944 293 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PRRT1Q99946 306 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MRI1Q9BV20 369 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SLCO5A1Q9H2Y9 848 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 C14orf105Q9NVL8 296 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 GPR160Q9UJ42 338 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 NPIPA1Q9UND3 350 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MYLKQ15746 1914 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 GPR182O15218 404 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FBXO24O75426 580 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CYP7B1O75881 506 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RGS9O75916 674 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FADS2O95864 444 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PSMB6P28072 239 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CDH8P55286 799 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TNK1Q13470 666 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 UBXN2BQ14CS0 331 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 VASNQ6EMK4 673 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FRMPD2BQ6IN97 320 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 HSDL2Q6YN16 418 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PLA2G15Q8NCC3 412 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RPL3LQ92901 407 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DCUN1D1Q96GG9 259 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TSNAXQ99598 290 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 HSD17B14Q9BPX1 270 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 THTPAQ9BU02 230 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 GPN1Q9HCN4 374 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TMEM59LQ9UK28 342 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RBM7Q9Y580 266 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 UBA6A0AVT1 1052 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TRIM49BA6NDI0 452 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TRIM49D1C9J1S8 452 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 HBP1O60381 514 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 VPS26AO75436 327 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FGBP02675 491 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 OR2T7P0C7T2 308 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 GNRHRP30968 328 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 EIF1AXP47813 144 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 XKP51811 444 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FAM189BP81408 668 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 BDH1Q02338 343 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FAM98CQ17RN3 349 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TDRD10Q5VZ19 366 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MPZL3Q6UWV2 235 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CPNE8Q86YQ8 564 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CMTR2Q8IYT2 770 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TCTE3Q8IZS6 198 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 GAL3ST3Q96A11 431 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RCN3Q96D15 328 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 LRCH3Q96II8 777 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DPEP2Q9H4A9 486 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CD320Q9NPF0 282 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 LYVE1Q9Y5Y7 322 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RPRD2Q5VT52 1461 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 HECW2Q9P2P5 1572 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 KIAA1549Q9HCM3 1950 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 AGRNO00468 2067 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TSPOAP1O95153 1857 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 RPLP1P05386 114 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PRDX5P30044 214 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TXNL4AP83876 142 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CAPSQ13938 189 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SHBQ15464 509 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FSCN1Q16658 493 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MED27Q6P2C8 311 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SCIMPQ6UWF3 145 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DPPA4Q7L190 304 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 LHFPL4Q7Z7J7 247 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PQLC1Q8N2U9 271 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 ALG14Q96F25 216 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 SENP5Q96HI0 755 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 FCRL3Q96P31 734 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MCCC1Q96RQ3 725 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TRMOQ9BU70 441 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 ROPN1BQ9BZX4 212 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CSTL1Q9H114 145 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 MTG2Q9H4K7 406 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 KIR3DX1Q9H7L2 352 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 ROPN1Q9HAT0 212 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 ZDHHC4Q9NPG8 344 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 OBP2BQ9NPH6 170 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TARBP1Q13395 1621 aaKnown RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 TRPM3Q9HCF6 1732 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DISP1Q96F81 1524 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 CPED1A4D0V7 1026 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 M0R036 132 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 PDCD5O14737 125 aa4.13□□□□□ -1.75
SCN3A-209ENST00000639244 DLEU1O43261 78 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 420.9 ms