RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TBX21	Q9UL17	535 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	RNF112	Q9ULX5	631 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SSR3	Q9UNL2	185 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TRAV20	A0A0B4J274	112 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306		A0A1W2PQL4	384 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TMEM82	A0PJX8	343 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306		M0R233	179 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	AIP	O00170	330 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	INSIG1	O15503	277 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	LDB2	O43679	373 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SELENOF	O60613	162 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	PIP	P12273	146 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	ZNF3	P17036	446 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	GABRB1	P18505	474 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	PSMA1	P25786	263 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	ZNF81	P51508	661 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	CAMK2G	Q13555	558 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TAF1A	Q15573	450 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	C6orf136	Q5SQH8	315 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	ERICH5	Q6P6B1	374 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	BHLHB9	Q6PI77	547 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	RASSF6	Q6ZTQ3	369 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TCEAL8	Q8IYN2	117 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	ADGRF3	Q8IZF5	1079 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	OR11H4	Q8NGC9	324 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	OR9Q1	Q8NGQ5	310 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	WDR36	Q8NI36	951 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	NSMAF	Q92636	917 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SCMH1	Q96GD3	660 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	C10orf90	Q96M02	699 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	COQ10A	Q96MF6	247 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	RBM14	Q96PK6	669 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SLC38A2	Q96QD8	506 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	BBS4	Q96RK4	519 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	KLF16	Q9BXK1	252 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TTYH1	Q9H313	450 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TFB2M	Q9H5Q4	396 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	EXOSC4	Q9NPD3	245 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	BRD7	Q9NPI1	651 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SDHAF3	Q9NRP4	125 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	MRPL17	Q9NRX2	175 aa	Known RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	EVL	Q9UI08	416 aa	Predicted RBP	10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	SCP2D1	Q9UJQ7	156 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	PCOLCE2	Q9UKZ9	415 aa		10.29	□□□□□ -0.76
CHD2-223	ENST00000636306	TET1	Q8NFU7	2136 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	OBSL1	O75147	1896 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	TRAV19	A0A0A6YYK7	116 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ADAM12	O43184	909 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	GJB5	O95377	273 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	SEMG1	P04279	462 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CYP17A1	P05093	508 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CLTB	P09497	229 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	SMIM6	P0DI80	62 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CALCR	P30988	508 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	AKT1	P31749	480 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CRYBB2	P43320	205 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	MAPK8	P45983	427 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	INPP1	P49441	399 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	PDSS1	Q5T2R2	415 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ANKS6	Q68DC2	871 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CHMP1B	Q7LBR1	199 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	GLT6D1	Q7Z4J2	308 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	CFAP52	Q8N1V2	620 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	TMEM132C	Q8N3T6	1108 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	TMEM145	Q8NBT3	493 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	BVES	Q8NE79	360 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	EPYC	Q99645	322 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ZNF251	Q9BRH9	671 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	APOL5	Q9BWW9	433 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	C1QTNF3	Q9BXJ4	246 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ESRP2	Q9H6T0	727 aa	Known RBP	10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	REEP1	Q9H902	201 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	HHATL	Q9HCP6	504 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	NLE1	Q9NVX2	485 aa	Predicted RBP	10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	SLCO1C1	Q9NYB5	712 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	GPR83	Q9NYM4	423 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	VAPA	Q9P0L0	249 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	PRKAG2	Q9UGJ0	569 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	MLX	Q9UH92	298 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ZNF222	Q9UK12	451 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	PCDHGA9	Q9Y5G4	932 aa	Known RBP	10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	INSL5	Q9Y5Q6	135 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	ANAPC1	Q9H1A4	1944 aa		10.28	□□□□□ -0.76
CHD2-223	ENST00000636306	MEIKIN	A0A087WXM9	373 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	PRAMEF33	A0A0G2JMD5	474 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	PIPSL	A2A3N6	862 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	MYO1G	B0I1T2	1018 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	HNRNPCL2	B2RXH8	293 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306		H3BNC9	293 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	MPZL2	O60487	215 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	PRAMEF10	O60809	474 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CCNDBP1	O95273	360 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	VIP	P01282	170 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	FABP3	P05413	133 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	ADRB1	P08588	477 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	CD1D	P15813	335 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	DNASE1	P24855	282 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	EPHA2	P29317	976 aa		10.27	□□□□□ -0.77
CHD2-223	ENST00000636306	HSPA7	P48741	367 aa		10.27	□□□□□ -0.77

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