RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	MYL9	P24844	172 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CLCN2	P51788	898 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PER3	P56645	1201 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OR4D2	P58180	307 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CDK3	Q00526	305 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CTBS	Q01459	385 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CD47	Q08722	323 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LAIR1	Q6GTX8	287 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KRT74	Q7RTS7	529 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	C7orf57	Q8NEG2	295 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	POP5	Q969H6	163 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	GPER1	Q99527	375 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ARNT2	Q9HBZ2	717 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	AIG1	Q9NVV5	245 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NLGN3	Q9NZ94	848 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SPATA2	Q9UM82	520 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MED31	Q9Y3C7	131 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RREB1	Q92766	1687 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SNX4	O95219	450 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	APOL3	O95236	402 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KCNC1	P48547	511 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KCNC3	Q14003	757 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SPATC1	Q76KD6	591 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OAF	Q86UD1	273 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MOSPD2	Q8NHP6	518 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NEK7	Q8TDX7	302 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	BTBD3	Q9Y2F9	522 aa		13.68	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SLC9A3	P48764	834 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TRAP1	Q12931	704 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NUP54	Q7Z3B4	507 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SLCO6A1	Q86UG4	719 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PDSS2	Q86YH6	399 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RASGEF1A	Q8N9B8	481 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	AQP11	Q8NBQ7	271 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KBTBD8	Q8NFY9	601 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	THUMPD1	Q9NXG2	353 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DLEC1	Q9Y238	1755 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SCO2	O43819	266 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SOX30	O94993	753 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ANXA8	P13928	327 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MC1R	Q01726	317 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DECR1	Q16698	335 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	REEP3	Q6NUK4	255 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ATG14	Q6ZNE5	492 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CXXC5	Q7LFL8	322 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZFAND4	Q86XD8	727 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	GEMIN6	Q8WXD5	167 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PYURF	Q96I23	114 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	EHD1	Q9H4M9	534 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RPF2	Q9H7B2	306 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SEC61A2	Q9H9S3	476 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FAM227A	F5H4B4	570 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ACSL1	P33121	698 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ACY1	Q03154	408 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	IRF4	Q15306	451 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	NDUFAF6	Q330K2	333 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CHERP	Q8IWX8	916 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MCHR1	Q99705	422 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FAM117A	Q9C073	453 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	GSTO2	Q9H4Y5	243 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	STMN3	Q9NZ72	180 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PRELID1	Q9Y255	219 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997		A0A075B6Q4	140 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FAM92A	A1XBS5	289 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	EPOP	A6NHQ4	379 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TNFRSF1B	P20333	461 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	GNAL	P38405	381 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CCR2	P41597	374 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	IST1	P53990	364 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MLLT10	P55197	1068 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZNF77	Q15935	545 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PYDC2	Q56P42	97 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	KLHL17	Q6TDP4	642 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TMPRSS11A	Q6ZMR5	421 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	C6orf120	Q7Z4R8	191 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CBARP	Q8N350	705 aa	Predicted RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	DNAJB8	Q8NHS0	232 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZNF347	Q96SE7	839 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	CCDC106	Q9BWC9	280 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	POLR2J2	Q9GZM3	115 aa	Known RBP	13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LDAH	Q9H6V9	325 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	METTL7A	Q9H8H3	244 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MCUB	Q9NWR8	336 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	RAB26	Q9ULW5	256 aa		13.67	□□□□□ -0.22
NEDD4L-238	ENST00000635997	FBP2	O00757	339 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	TLX2	O43763	284 aa	Predicted RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SORBS2	O94875	1100 aa	Known RBP	13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ZP2	Q05996	745 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	PNCK	Q6P2M8	343 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SYT13	Q7L8C5	426 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OR4K17	Q8NGC6	315 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	OR51A7	Q8NH64	312 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	MYEOV	Q96EZ4	313 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	LRRC46	Q96FV0	321 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	ALPK1	Q96QP1	1244 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	SLC30A3	Q99726	388 aa		13.66	□□□□□ -0.22
NEDD4L-238	ENST00000635997	HCRTR2	O43614	444 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms