RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 TRAT1Q6PIZ9 186 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 ZNF525Q8N782 197 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 SMYD1Q8NB12 490 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 KIAA0895Q8NCT3 520 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 EXOC4Q96A65 974 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 ESAMQ96AP7 390 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 ERP27Q96DN0 273 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 PARK7Q99497 189 aaKnown RBP2.41□□□□□ -2.02
SRP54-214ENST00000630962 PAXXQ9BUH6 204 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 LIME1Q9H400 295 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 CUEDC2Q9H467 287 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 ZNF665Q9H7R5 613 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 TUFT1Q9NNX1 390 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 MRPL17Q9NRX2 175 aaKnown RBP2.41□□□□□ -2.02
SRP54-214ENST00000630962 CHCHD3Q9NX63 227 aaKnown RBP2.41□□□□□ -2.02
SRP54-214ENST00000630962 RSPH14Q9UHP6 348 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 FBXL5Q9UKA1 691 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 IKZF3Q9UKT9 509 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 POMT1Q9Y6A1 747 aa2.41□□□□□ -2.02
SRP54-214ENST00000630962 KIAA1217Q5T5P2 1943 aa2.4□□□□□ -2.02
SRP54-214ENST00000630962 TRAV9-2A0A087WT02 112 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ATP6AP2A0A1C7CYW4 349 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 A0A1W2PQ72 361 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 TNFSF11O14788 317 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 CTDSPLO15194 276 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 LRRTM2O43300 516 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 TIMM44O43615 452 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ATP9AO75110 1047 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ZNF253O75346 499 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 VENTXO95231 258 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 PRAMEF12O95522 483 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 APBB3O95704 486 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 FOSL2P15408 326 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 GPX3P22352 226 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 PRKAR2BP31323 418 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 PRKCIP41743 596 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 OVGP1Q12889 678 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SLC17A1Q14916 467 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 C17orf58Q2M2W7 97 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ANKRD55Q3KP44 614 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 CAPN13Q6MZZ7 669 aaPredicted RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 KLHDC8AQ8IYD2 350 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SLC22A18ASQ8N1D0 253 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 C11orf42Q8N5U0 333 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 OR1K1Q8NGR3 316 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 VN1R17PQ8TDU5 208 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SLCO4A1Q96BD0 722 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SNRNP40Q96DI7 357 aaKnown RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 CDKN2AIPNLQ96HQ2 116 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ERGIC2Q96RQ1 377 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 MCCC1Q96RQ3 725 aaPredicted RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 RAB40CQ96S21 281 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SSX3Q99909 188 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 THUMPD3Q9BV44 507 aaKnown RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 NAPBQ9H115 298 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 SRD5A3Q9H8P0 318 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 PDFQ9HBH1 243 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ABCB10Q9NRK6 738 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ZNF275Q9NSD4 429 aaPredicted RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 IMPAD1Q9NX62 359 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 VNN3Q9NY84 501 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 DHRS4-AS1Q9P1J3 65 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 ZNF346Q9UL40 294 aaKnown RBP2.4□□□□□ -2.03
SRP54-214ENST00000630962 ACEP12821 1306 aa2.4□□□□□ -2.03
SRP54-214ENST00000630962 FGD5Q6ZNL6 1462 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 COL16A1Q07092 1604 aaPredicted RBP2.39□□□□□ -2.03
SRP54-214ENST00000630962 C13orf42A0A1B0GVH6 325 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 E7ENQ6 273 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 B4GAT1O43505 415 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CRCPO75575 148 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 NUDT14O95848 222 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 TNFRSF4P43489 277 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 HSPA14Q0VDF9 509 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 BFSP1Q12934 665 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 PTK6Q13882 451 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 SPHARQ15513 63 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 LTB4RQ15722 352 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 ZNF79Q15937 498 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 GSG1Q2KHT4 349 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 SHROOM1Q2M3G4 852 aaPredicted RBP2.39□□□□□ -2.03
SRP54-214ENST00000630962 FUT11Q495W5 492 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CAVIN1Q6NZI2 390 aaKnown RBP2.39□□□□□ -2.03
SRP54-214ENST00000630962 CD164L2Q6UWJ8 174 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 C2orf66Q6UXQ4 117 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CCDC71Q8IV32 467 aaPredicted RBP2.39□□□□□ -2.03
SRP54-214ENST00000630962 NHLRC2Q8NBF2 726 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 ATAD1Q8NBU5 361 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CCDC197Q8NCU1 140 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 ZNRF1Q8ND25 227 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 Q8NFD4 153 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 SPATA18Q8TC71 538 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 FBXO25Q8TCJ0 367 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 GPR148Q8TDV2 347 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CORO2AQ92828 525 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 NTNG2Q96CW9 530 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 CCDC114Q96M63 670 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 GUCD1Q96NT3 240 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 S1PR3Q99500 378 aa2.39□□□□□ -2.03
SRP54-214ENST00000630962 WWP1Q9H0M0 922 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms