RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 EGFL8Q99944 293 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 EPB41L4BQ9H329 900 aa18.51■□□□□ 0.55
TARDBP-228ENST00000629725 COL6A5A8TX70 2615 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 ARHGEF9O43307 516 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 WDR47O94967 919 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 TBX6O95947 436 aaPredicted RBP18.5■□□□□ 0.55
TARDBP-228ENST00000629725 COX7A2P14406 83 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 CXCR5P32302 372 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 FAM45BPQ6NSW5 357 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 GALNT7Q86SF2 657 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 PM20D2Q8IYS1 436 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 FAM45AQ8TCE6 357 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 NT5DC2Q9H857 520 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 PROK2Q9HC23 129 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 CNIH4Q9P003 139 aa18.5■□□□□ 0.55
TARDBP-228ENST00000629725 FBN1P35555 2871 aaKnown RBP18.5■□□□□ 0.55
TARDBP-228ENST00000629725 TLN2Q9Y4G6 2542 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 EEF1E1-BLOC1S5C9J1V9 151 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 CDC7O00311 574 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 EEF1E1O43324 174 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 TTC4O95801 387 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 HRGP04196 525 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 GDF1P27539 372 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 GDF5P43026 501 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 AGFG1P52594 562 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 CDKL1Q00532 357 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 ID2Q02363 134 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 CRYZQ08257 329 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 POU4F3Q15319 338 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 SF3B4Q15427 424 aaKnown RBP eCLIP18.49■□□□□ 0.552e-7■□□□□ 10.4
TARDBP-228ENST00000629725 GAS2L3Q86XJ1 694 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 C9orf40Q8IXQ3 194 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 DND1Q8IYX4 353 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 SLC15A4Q8N697 577 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 LRRN4CLQ8ND94 238 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 FAM13CQ8NE31 585 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 SENP5Q96HI0 755 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 TIMP4Q99727 224 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 DOHHQ9BU89 302 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 REPIN1Q9BWE0 567 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 PITHD1Q9GZP4 211 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 LYRM4Q9HD34 91 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 PPANQ9NQ55 473 aaKnown RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 PRDM7Q9NQW5 492 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 SLC17A6Q9P2U8 582 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 CORO1CQ9ULV4 474 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 CHCHD2Q9Y6H1 151 aaPredicted RBP18.49■□□□□ 0.55
TARDBP-228ENST00000629725 DOCK7Q96N67 2140 aa18.49■□□□□ 0.55
TARDBP-228ENST00000629725 NPEPPSL1A6NEC2 478 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 PCSK6P29122 969 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 KCNC1P48547 511 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 TGM3Q08188 693 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 SPANXN3Q5MJ09 141 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 NSUN5P2Q63ZY6 315 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 LYPD8Q6UX82 237 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 VN1R5Q7Z5H4 357 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 CXorf67Q86X51 503 aaPredicted RBP18.48■□□□□ 0.55
TARDBP-228ENST00000629725 P3H2Q8IVL5 708 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 RASGEF1CQ8N431 466 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 SPC24Q8NBT2 197 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 C7orf57Q8NEG2 295 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 OR10G3Q8NGC4 313 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 MAGOHBQ96A72 148 aaKnown RBP18.48■□□□□ 0.55
TARDBP-228ENST00000629725 CERS2Q96G23 380 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 COX4I2Q96KJ9 171 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 KCNC2Q96PR1 638 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 OARD1Q9Y530 152 aa18.48■□□□□ 0.55
TARDBP-228ENST00000629725 ARID1AO14497 2285 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 DYRK3O43781 588 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 C1QAP02745 245 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 IGKV3-11P04433 115 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 ZNF37AP17032 561 aaPredicted RBP18.47■□□□□ 0.55
TARDBP-228ENST00000629725 CTSSP25774 331 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 SERPINB3P29508 390 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 OPRM1P35372 400 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 SLC6A12P48065 614 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 C18orf21Q32NC0 220 aaPredicted RBP18.47■□□□□ 0.55
TARDBP-228ENST00000629725 Q5PR19 223 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 TEDDM1Q5T9Z0 273 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 ADNP2Q6IQ32 1131 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 PPIL6Q8IXY8 311 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 VWA5B2Q8N398 1253 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 SPATA3Q8NHX4 192 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 ANKRD7Q92527 254 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 ANKRD9Q96BM1 317 aaPredicted RBP18.47■□□□□ 0.55
TARDBP-228ENST00000629725 DACH2Q96NX9 599 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 DGAT2Q96PD7 388 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 F2RL3Q96RI0 385 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 MAPKAP1Q9BPZ7 522 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 CAPS2Q9BXY5 557 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 PRDM14Q9GZV8 571 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 JKAMPQ9P055 326 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 SPACA6W5XKT8 324 aa18.47■□□□□ 0.55
TARDBP-228ENST00000629725 A0A1W2PPR1 153 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 TRAPPC6AO75865 159 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 LRATO95237 230 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 FBXO45P0C2W1 286 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 MSH2P43246 934 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 STT3AP46977 705 aa18.46■□□□□ 0.55
TARDBP-228ENST00000629725 CCDC137Q6PK04 289 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms