RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TRA2BP62995 288 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 KLC1Q07866 573 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 GAB1Q13480 694 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 IFNEQ86WN2 208 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CALHM3Q86XJ0 350 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC35F3Q8IY50 421 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 ARHGEF39Q8N4T4 335 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CAMKVQ8NCB2 501 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 OR8K5Q8NH50 307 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM110BQ8TC76 370 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 NT5CQ8TCD5 201 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 TTC9Q92623 222 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 GAL3ST3Q96A11 431 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 RERGQ96A58 199 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 SMIM10Q96HG1 83 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 ECSITQ9BQ95 431 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 TBCDQ9BTW9 1192 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 THUMPD3Q9BV44 507 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 MUC13Q9H3R2 512 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 KAT8Q9H7Z6 458 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 CPNE5Q9HCH3 593 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 S100A14Q9HCY8 104 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 STX18Q9P2W9 335 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 BTNL2Q9UIR0 455 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 RNF215Q9Y6U7 377 aa8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 FLNBO75369 2602 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-223ENST00000627587 TCRBV3S1A0A5B6 114 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 K7ENP7 123 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ARPC2O15144 300 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 DNAJB6O75190 326 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 GUCY1B2O75343 617 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 PRKRAO75569 313 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SCELO95171 688 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CPSF4O95639 269 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 MYF5P13349 255 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 DDCP20711 480 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 HIST1H1TP22492 207 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 EPHA4P54764 986 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 RAB8AP61006 207 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 HBA1P69905 142 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 MRPS22P82650 360 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 EIF3IQ13347 325 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SLC9A5Q14940 896 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 LCN8Q6JVE9 175 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 IRGCQ6NXR0 463 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 INO80CQ6PI98 192 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CYP2R1Q6VVX0 501 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CCDC81Q6ZN84 652 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SPATA24Q86W54 205 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 DHFR2Q86XF0 187 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 TICAM1Q8IUC6 712 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CLEC4FQ8N1N0 589 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF655Q8N720 491 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ARL10Q8N8L6 244 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ACOT4Q8N9L9 421 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 OR6C4Q8NGE1 309 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 GOT1L1Q8NHS2 421 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 KLHL6Q8WZ60 621 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SLCO4A1Q96BD0 722 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 LRGUKQ96M69 825 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 TRIM15Q9C019 465 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 PIF1Q9H611 641 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 COPS7BQ9H9Q2 264 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 C5AR2Q9P296 337 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 PCDHGB4Q9UN71 923 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SATB2Q9UPW6 733 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 MRPS2Q9Y399 296 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ASB4Q9Y574 426 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 GMEB1Q9Y692 573 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 LOC400499M0QZD8 3231 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 KALRNO60229 2985 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ASH1LQ9NR48 2969 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SMG1Q96Q15 3661 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CCDC187A0A096LP49 1063 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 TCRBV5S2A0A599 114 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CDRT15L2A8MXV6 281 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 EVPLLA8MZ36 301 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 H0YGG7 62 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 NUDT21O43809 227 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 KIF1CO43896 1103 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 TBX19O60806 448 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 FAM58BPP0C7Q3 252 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ANPEPP15144 967 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 NCK1P16333 377 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 CERS1P27544 350 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 HTR1EP28566 365 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 SOX11P35716 441 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 FRKP42685 505 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ALDH9A1P49189 494 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 MVDP53602 400 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 GFERP55789 205 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ARF3P61204 181 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 KCNC4Q03721 635 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 C3orf38Q5JPI3 329 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ZFP1Q6P2D0 407 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF621Q6ZSS3 439 aa8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 ZCCHC7Q8N3Z6 543 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-223ENST00000627587 DTWD1Q8N5C7 304 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms