RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 RPGRIP1LQ68CZ1 1315 aa2.1□□□□□ -2.07
CHD2-203ENST00000625243 KAT6BQ8WYB5 2073 aa2.1□□□□□ -2.07
CHD2-203ENST00000625243 CACNA1FO60840 1977 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 A0A087X002 238 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 RNF103-CHMP3A0A140T963 221 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 MACROD2A1Z1Q3 448 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 BCLAF3A2AJT9 711 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 C5orf51A6NDU8 294 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 ARHGAP42A6NI28 874 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 E9PQ18 207 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 H0YIG0 161 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 K7EQD1 137 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 SLC28A1O00337 649 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 IDH3BO43837 385 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 SSX5O60225 188 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 ZFAND5O76080 213 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 DUS4LO95620 317 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 ZSCAN5DPP0CG00 497 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 EDNRAP25101 427 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 CNN1P51911 297 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 GEMP55040 296 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 BACE1P56817 501 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 EVCP57679 992 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 FASTKQ14296 549 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 GK2Q14410 553 aaPredicted RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 MEF2DQ14814 521 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 HEPACAMQ14CZ8 416 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 OR1C1Q15619 314 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 ECSCRQ19T08 205 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 ZNF774Q6NX45 483 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 CWC27Q6UX04 472 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 OLFM4Q6UX06 510 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 CATSPER3Q86XQ3 398 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 RNF130Q86XS8 419 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 CACUL1Q86Y37 369 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 STHQ8IWL8 128 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 DND1Q8IYX4 353 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 GVQW1Q8N7I0 195 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 BEST4Q8NFU0 473 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 OR6M1Q8NGM8 313 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 OR4A16Q8NH70 328 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 EXOC6Q8TAG9 804 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 FBXO25Q8TCJ0 367 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 GPR148Q8TDV2 347 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 NPRL2Q8WTW4 380 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 MOCOSQ96EN8 888 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 CNRIP1Q96F85 164 aaPredicted RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 C16orf58Q96GQ5 468 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 NSMCE2Q96MF7 247 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 FAM218AQ96MZ4 157 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 PRAM1Q96QH2 718 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 IWS1Q96ST2 819 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 PKP2Q99959 881 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 RBM4BQ9BQ04 359 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 CABLES2Q9BTV7 478 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 NTMT1Q9BV86 223 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 SLC26A1Q9H2B4 701 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 PNNQ9H307 717 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 DCTPP1Q9H773 170 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 DCLRE1BQ9H816 532 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 PLEKHA3Q9HB20 300 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 PIGVQ9NUD9 493 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.09□□□□□ -2.07
CHD2-203ENST00000625243 KCNN3Q9UGI6 736 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 MUTYHQ9UIF7 546 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 MRTO4Q9UKD2 239 aaKnown RBP2.09□□□□□ -2.07
CHD2-203ENST00000625243 MOB4Q9Y3A3 225 aa2.09□□□□□ -2.07
CHD2-203ENST00000625243 IGHV4-30-2A0A087WSY4 118 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 BICDL2A1A5D9 508 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 OR5H15A6NDH6 313 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 IGLON5A6NGN9 336 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 A8MXK9 166 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 CFLARO15519 480 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 TLX2O43763 284 aaPredicted RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 VEGFDO43915 354 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 SEC22BO75396 215 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 LRCH4O75427 683 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 BCAS2O75934 225 aaPredicted RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 POP4O95707 220 aaKnown RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 TXNDC12O95881 172 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 PDGFBP01127 241 aaPredicted RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 PTMAP06454 111 aaKnown RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 PGK2P07205 417 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 NUDT17P0C025 328 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 B4GALT1P15291 398 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 ARF4P18085 180 aaPredicted RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 UGT1A6P19224 532 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 IL10P22301 178 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 FCARP24071 287 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 CALML3P27482 149 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 GJB2P29033 226 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 PPP2R1BP30154 601 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 ZFP36L2P47974 494 aaKnown RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 SLC1A6P48664 564 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 HNRNPFP52597 415 aaKnown RBP2.08□□□□□ -2.08
CHD2-203ENST00000625243 HERV-K104P63124 156 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 SRPXP78539 464 aa2.08□□□□□ -2.08
CHD2-203ENST00000625243 MS4A2Q01362 244 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms