RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 SSR2P43308 183 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 PMS2P3Q13401 168 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 RAB39AQ14964 217 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 FAM98BQ52LJ0 330 aaKnown RBP17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 NHSL2Q5HYW2 709 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 TBPL2Q6SJ96 375 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 TMEM26Q6ZUK4 368 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 DEFB123Q8N688 67 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 MFSD2AQ8NA29 543 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 KCT2Q8NC54 265 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 SLC35A5Q9BS91 424 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 ACTR10Q9NZ32 417 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 SPAG17Q6Q759 2223 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 OR2A25A4D2G3 310 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 ALOX5P09917 674 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 JUNDP17535 347 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 PPP1CAP62136 330 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 KIR2DS3Q14952 304 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 SLC5A12Q1EHB4 618 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 TMEM35AQ53FP2 167 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 TOR1AIP1Q5JTV8 583 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 FCRL6Q6DN72 434 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 CADM3Q8N126 398 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 ZNF786Q8N393 782 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 TFAP2CQ92754 450 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 SLC47A1Q96FL8 570 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 SHDQ96IW2 340 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 ALPK1Q96QP1 1244 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 C9orf16Q9BUW7 83 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 CXorf36Q9H7Y0 433 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 RAPGEFL1Q9UHV5 662 aa17.51■□□□□ 0.39
PCDHB2-202ENST00000622947 GSAPA4D1B5 854 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 GCM2O75603 506 aaPredicted RBP17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 LDLRP01130 860 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 ETFAP13804 333 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CTSEP14091 401 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CD27P26842 260 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 NUDT1P36639 197 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 PCBP4P57723 403 aaKnown RBP17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 RAB8AP61006 207 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CHRNB3Q05901 458 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 LRRC74AQ0VAA2 488 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 NFATC3Q12968 1075 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 TJAP1Q5JTD0 557 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 AGAP7PQ5VUJ5 663 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 ZNF438Q7Z4V0 828 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 IQCF2Q8IXL9 164 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CNDP2Q96KP4 475 aaKnown RBP17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 QRFPRQ96P65 431 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 OSBPL10Q9BXB5 764 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 SACM1LQ9NTJ5 587 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 POT1Q9NUX5 634 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 IFT52Q9Y366 437 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 ASB4Q9Y574 426 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CACNA1IQ9P0X4 2223 aa17.5■□□□□ 0.39
PCDHB2-202ENST00000622947 CLOCKO15516 846 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 TNFSF14O43557 240 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 SH3BP5O60239 455 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 TBX19O60806 448 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 NDUFS2O75306 463 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 PRSS23O95084 383 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 RASAL1O95294 804 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 PVRP15151 417 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 HIST1H1TP22492 207 aaPredicted RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 HEPACAMQ14CZ8 416 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 TMTC4Q5T4D3 741 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 MRM1Q6IN84 353 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ACOT4Q8N9L9 421 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 FAM46DQ8NEK8 389 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 OR2L5Q8NG80 312 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 SLC22A18Q96BI1 424 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 UGT2B28Q9BY64 529 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 SIAEQ9HAT2 523 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ZNF639Q9UID6 485 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 MAGED1Q9Y5V3 778 aaPredicted RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ANKRD34BA5PLL1 514 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 GLOD5A6NK44 160 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ZW10O43264 779 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 B4GALT2O60909 372 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 TNFRSF21O75509 655 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 DCNP07585 359 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 TCEA1P23193 301 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ATP5A1P25705 553 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 FRKP42685 505 aaPredicted RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 IST1P53990 364 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 NDUFAF5Q5TEU4 345 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 VASH1Q7L8A9 365 aaPredicted RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 SPEM1Q8N4L4 309 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 PJA1Q8NG27 643 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 CLDN23Q96B33 292 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 OR2A5Q96R48 311 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 NELL2Q99435 816 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 EPS8L2Q9H6S3 715 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 WBP11Q9Y2W2 641 aaKnown RBP17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 ATG4BQ9Y4P1 393 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 DMDP11532 3685 aa17.49■□□□□ 0.39
PCDHB2-202ENST00000622947 KIR2DS5A0A0G2JLQ3 304 aa17.48■□□□□ 0.39
PCDHB2-202ENST00000622947 A0A0G2JNG1 304 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms