RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KLLNB2CW77 178 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TRAFD1O14545 582 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-229ENST00000621897 MAGEB2O15479 319 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 VEGFDO43915 354 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 SPAG6O75602 509 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 RPLP0P05388 317 aaKnown RBP3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TSPY4P0CV99 314 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TSPY10P0CW01 314 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 RDXP35241 583 aaKnown RBP3.37□□□□□ -1.87
BRCA1-229ENST00000621897 NPY4RP50391 375 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 RAB28P51157 221 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 CASP9P55211 416 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 MTCP1P56278 107 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 CACNG1Q06432 222 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 CHIT1Q13231 466 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 IDI1Q13907 227 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 STK11Q15831 433 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 HYAL4Q2M3T9 481 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TWISTNBQ3B726 338 aaPredicted RBP3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TEX35Q5T0J7 233 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 ETFRF1Q6IPR1 90 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TMEM270Q6UE05 265 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 REG3GQ6UW15 175 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 BNIPLQ7Z465 357 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 C5orf24Q7Z6I8 188 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 PIGWQ7Z7B1 504 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TAF8Q7Z7C8 310 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 PI4KAP1Q8N8J0 262 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 ATAD1Q8NBU5 361 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 SPPL2AQ8TCT8 520 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 C17orf50Q8WW18 174 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 NSMAFQ92636 917 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 RAB7BQ96AH8 199 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 HDAC11Q96DB2 347 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 NXPE2Q96DL1 559 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 DTNBP1Q96EV8 351 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 RBM41Q96IZ5 413 aaKnown RBP3.37□□□□□ -1.87
BRCA1-229ENST00000621897 EPSTI1Q96J88 318 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 SLC25A23Q9BV35 468 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 NFKBIZQ9BYH8 718 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 FZD8Q9H461 694 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 EHD1Q9H4M9 534 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 JPT2Q9H910 190 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 IL1RAPQ9NPH3 570 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 FBXL4Q9UKA2 621 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 CDH7Q9ULB5 785 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 ASB3Q9Y575 518 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 NPHP3Q7Z494 1330 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 SPATA31D1Q6ZQQ2 1576 aa3.37□□□□□ -1.87
BRCA1-229ENST00000621897 A0A087WWV3 80 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ARHGEF37A1IGU5 675 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 SYCE3A1L190 88 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 XKRY2A2RUG3 117 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 H0YCG3 227 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 NMT2O60551 498 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF354AO60765 605 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 PRDM1O75626 825 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 STAG3L1P0CL83 205 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 GHRP10912 638 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 PRG2P13727 222 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ERCC2P18074 760 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 HSD17B3P37058 310 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 DHPSP49366 369 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 KIAA1024LP59773 190 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 BTG1P62324 171 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 TRA2BP62995 288 aaKnown RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ELP6Q0PNE2 266 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 RPS6KA1Q15418 735 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 UPP1Q16831 310 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 FGD3Q5JSP0 725 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 SPATA46Q5T0L3 261 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 FAM182AQ5T1J6 154 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 AADACL4Q5VUY2 407 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ZCCHC12Q6PEW1 402 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 CDH26Q8IXH8 852 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ARL14Q8N4G2 192 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 FAM133AQ8N9E0 248 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 AGR3Q8TD06 166 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 MRPS27Q92552 414 aaKnown RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 PRCCQ92733 491 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 MRPL38Q96DV4 380 aaKnown RBP3.36□□□□□ -1.87
BRCA1-229ENST00000621897 NRBF2Q96F24 287 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 PGM2Q96G03 612 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 NACAP1Q9BZK3 213 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 RNF121Q9H920 327 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 HOMER3Q9NSC5 361 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 GDAP2Q9NXN4 497 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 PILRAQ9UKJ1 303 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 FAM205AQ6ZU69 1335 aa3.36□□□□□ -1.87
BRCA1-229ENST00000621897 ARHGEF33A8MVX0 844 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 H3BMM5 538 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 CCDC188H7C350 402 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 CXCL11O14625 94 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 IFIT3O14879 490 aaKnown RBP3.35□□□□□ -1.87
BRCA1-229ENST00000621897 ZNF749O43361 778 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 YEATS4O95619 227 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 TPM1P09493 284 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 C4BPBP20851 252 aa3.35□□□□□ -1.87
BRCA1-229ENST00000621897 GPR183P32249 361 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms