RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 EMX2Q04743 252 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SERTAD2Q14140 314 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC36A3Q495N2 470 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TRIM61Q5EBN2 209 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ANKRD26P1Q6NSI1 321 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 FRMD7Q6ZUT3 714 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PPP1R3BQ86XI6 285 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TTC9BQ8N6N2 239 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 IL17RCQ8NAC3 791 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PLEKHO2Q8TD55 490 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 F2RL3Q96RI0 385 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PCDHAC1Q9H158 963 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TBCCD1Q9NVR7 557 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PEX16Q9Y5Y5 336 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 THSD7AQ9UPZ6 1657 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 RFXAPO00287 272 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TYROBPO43914 113 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 AIREO43918 545 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PPM1BO75688 479 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SPARCP09486 303 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 BMP4P12644 408 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HSD3B1P14060 373 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HSD3B2P26439 372 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TCEAL1Q15170 157 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CMPK2Q5EBM0 449 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 KCTD18Q6PI47 426 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 NXPE4Q6UWF7 544 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF440Q8IYI8 595 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF548Q8NEK5 533 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 C17orf50Q8WW18 174 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 MSANTD3Q96H12 275 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PHF12Q96QT6 1004 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 IL4I1Q96RQ9 567 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PEBP4Q96S96 227 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 GPN2Q9H9Y4 310 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 TRIM36Q9NQ86 728 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 OARD1Q9Y530 152 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 GMEB1Q9Y692 573 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 IGKV6D-21A0A0A0MT36 114 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 DRD2P14416 443 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 HOXB9P17482 250 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 CKMT2P17540 419 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 GLDCP23378 1020 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 BDH1Q02338 343 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 ABHD18Q0P651 414 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 SPANXN4Q5MJ08 99 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 PYHIN1Q6K0P9 492 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 THRSPQ92748 146 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 MTG2Q9H4K7 406 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 KAT8Q9H7Z6 458 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 GNG8Q9UK08 70 aa9.38□□□□□ -0.91
CLTCL1-211ENST00000621271 BTAF1O14981 1849 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 GPR89AB7ZAQ6 455 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 NUAK1O60285 661 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ARL6IP5O75915 188 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 H2BFMP0C1H6 154 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 GPR89BP0CG08 455 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ACADVLP49748 655 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 GPR143P51810 404 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MPP2Q14168 576 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ODF4Q2M2E3 257 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR6N2Q8NGY6 317 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR56A3Q8NH54 315 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 FAM174AQ8TBP5 190 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 CITED4Q96RK1 184 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 LRIT1Q9P2V4 623 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SPEF1Q9Y4P9 236 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF99A8MXY4 864 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 EI24O14681 340 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 YKT6O15498 198 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ATE1O95260 518 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 S1PR1P21453 382 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 TIA1P31483 386 aaKnown RBP eCLIP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 RRADP55042 308 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 PITX1P78337 314 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC35G1Q2M3R5 365 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 DCAF12Q5T6F0 453 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OR4C11Q6IEV9 310 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC2A7Q6PXP3 512 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 VN1R2Q8NFZ6 395 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ANKMY1Q9P2S6 941 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 CYTH4Q9UIA0 394 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 PTBP2Q9UKA9 531 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 TMEM189-UBE2V1I3L0A0 370 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 J3QLW9 94 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ADAMTS4O75173 837 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 PRKD3O94806 890 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 ZNF19P17023 458 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 TIGD6Q17RP2 521 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 CEP76Q8TAP6 659 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SPRYD4Q8WW59 207 aaPredicted RBP9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 NSMAFQ92636 917 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 OSTF1Q92882 214 aa9.37□□□□□ -0.91
CLTCL1-211ENST00000621271 SLC46A2Q9BY10 475 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms