RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ATG9BQ674R7 924 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CLEC6AQ6EIG7 209 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CNKSR3Q6P9H4 555 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 OR10Q1Q8NGQ4 319 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 OR10R2Q8NGX6 335 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 GPR151Q8TDV0 419 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 ASF1BQ9NVP2 202 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 CD300AQ9UGN4 299 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 COL1A2P08123 1366 aa6.91□□□□□ -1.3
COLCA1-205ENST00000620864 FUOMA2VDF0 154 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 FAM170BA6NMN3 283 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TMEM150CB9EJG8 249 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 PIP5K1CO60331 668 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CREG1O75629 220 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HBE1P02100 147 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 BDKRB2P30411 391 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 NCBP2P52298 156 aaKnown RBP eCLIP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 IRF5Q13568 498 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GALNT13Q8IUC8 556 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HMGB4Q8WW32 186 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CACNG6Q9BXT2 260 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TBL1XR1Q9BZK7 514 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TIGARQ9NQ88 270 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 ZMAT5Q9UDW3 170 aaKnown RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 ADAM18Q9Y3Q7 739 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 A0A1W2PPW3 197 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HMX3A6NHT5 357 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 P2RX6O15547 441 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SLC25A17O43808 307 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SNCGO76070 127 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 RECQL4O94761 1208 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 OR1D2P34982 312 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 MTPNP58546 118 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GAD2Q05329 585 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TUSC3Q13454 348 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 UGT8Q16880 541 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TICAM1Q8IUC6 712 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 PLD6Q8N2A8 252 aaKnown RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 OR4K2Q8NGD2 314 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SMAP2Q8WU79 429 aaPredicted RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 FRZBQ92765 325 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CMTM7Q96FZ5 175 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 RBP7Q96R05 134 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SDHAF2Q9NX18 166 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 DHDHQ9UQ10 334 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SLC22A31A6NKX4 558 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TO15178 435 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 UPK1BO75841 260 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 TFP02787 698 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 MT-ND1P03886 318 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HNF1AP20823 631 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 AGXTP21549 392 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 AHCYP23526 432 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 KCNC1P48547 511 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 DNAJB13P59910 316 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GRIK2Q13002 908 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GPR157Q5UAW9 335 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 EPGNQ6UW88 154 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 LCLAT1Q6UWP7 414 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HACD2Q6Y1H2 254 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 OR8J1Q8NGP2 316 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 LILRB4Q8NHJ6 448 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 HS6ST2Q96MM7 605 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CYB5BO43169 146 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GPR137BO60478 399 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 S100A8P05109 93 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 EN2P19622 333 aaPredicted RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 MAT2AP31153 395 aaKnown RBP6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CDH15P55291 814 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 ERVK-25P63136 954 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 C19orf35Q6ZS72 473 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GTF2H5Q6ZYL4 71 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 PIGZQ86VD9 579 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 KDM1BQ8NB78 822 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 OR56A3Q8NH54 315 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 BBS10Q8TAM1 723 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 RAB39BQ96DA2 213 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 GAL3ST4Q96RP7 486 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 CMKLR1Q99788 373 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 SLC19A3Q9BZV2 496 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 ATG5Q9H1Y0 275 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 BPIFA1Q9NP55 256 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 MS4A12Q9NXJ0 267 aa6.9□□□□□ -1.3
COLCA1-205ENST00000620864 METTL15P1P0C7V9 234 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 HSPA7P48741 367 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 UPP1Q16831 310 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 RNASE10Q5GAN6 216 aaKnown RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SLC27A4Q6P1M0 643 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 HIST2H3AQ71DI3 136 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 PRSS48Q7RTY5 328 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 CYP2W1Q8TAV3 490 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TM9SF4Q92544 642 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 SAMD11Q96NU1 681 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TSSK6Q9BXA6 273 aa6.9□□□□□ -1.31
COLCA1-205ENST00000620864 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.31
COLCA1-205ENST00000620864 D6RAR5 112 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms