RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 FAR2Q96K12 515 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 TMEM237Q96Q45 408 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 SERINC2Q96SA4 455 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 SCN2AQ99250 2005 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 MTERF1Q99551 399 aaKnown RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 SMAD5Q99717 465 aaKnown RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 WDR77Q9BQA1 342 aaPredicted RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 TBCDQ9BTW9 1192 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 SLC25A23Q9BV35 468 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 ERVK-6Q9BXR3 956 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 ZNF717Q9BY31 904 aaPredicted RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 OR51B5Q9H339 312 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 ZBTB20Q9HC78 741 aaPredicted RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 ZNF160Q9HCG1 818 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 DMRT3Q9NQL9 472 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 MBNL3Q9NUK0 354 aaKnown RBP6.12□□□□□ -1.43
BRCC3-209ENST00000620502 KCMF1Q9P0J7 381 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 GRID1Q9ULK0 1009 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 PLAAQ9Y263 795 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 CLDN16Q9Y5I7 305 aa6.12□□□□□ -1.43
BRCC3-209ENST00000620502 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 IGKV3D-11A0A0A0MRZ8 115 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 NSG1A0A0A6YYJ2 146 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 FOXE1O00358 373 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 PLPP1O14494 284 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 UBFD1O14562 309 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 COPEO14579 308 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 B3GALT2O43825 422 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SEC24DO94855 1032 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SUPT7LO94864 414 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 OR4F21O95013 312 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 OTCP00480 354 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SERPINA7P05543 415 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 TUBBP07437 444 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 RNASE1P07998 156 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CELA2AP08217 269 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MYL2P10916 166 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 RNH1P13489 461 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CPA3P15088 417 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CREB1P16220 341 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MAOAP21397 527 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 HIST1H1TP22492 207 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 JAK1P23458 1154 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ITGA3P26006 1051 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CERS1P27544 350 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 HPDP32754 393 aaPredicted RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 BSGP35613 385 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CCNG1P51959 295 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 PGDP52209 483 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 HNRNPFP52597 415 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ARFIP1P53367 373 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 RAB38P57729 211 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 DNAJB13P59910 316 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 EEF1A2Q05639 463 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ZNF844Q08AG5 666 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 IFFO1Q0D2I5 559 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CUL3Q13618 768 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 DDX39BQ13838 428 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ABRAXAS2Q15018 415 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 NSDHLQ15738 373 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 CCDC153Q494R4 210 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SFT2D3Q587I9 215 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 COLEC12Q5KU26 742 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MFSD4BQ5TF39 518 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 FRG2Q64ET8 278 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 OR4C11Q6IEV9 310 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 IGFL2Q6UWQ7 119 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 IGFL3Q6UXB1 125 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 QSOX2Q6ZRP7 698 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 NLRC3Q7RTR2 1065 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SLC22A9Q8IVM8 553 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SCUBE1Q8IWY4 988 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ACOT4Q8N9L9 421 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SRFBP1Q8NEF9 429 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MYRIPQ8NFW9 859 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 RDH11Q8TC12 318 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 TRPC4APQ8TEL6 797 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 METTL21AQ8WXB1 218 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 TSLPQ969D9 159 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 UBE2FQ969M7 185 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 RGMAQ96B86 450 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 REPS1Q96D71 796 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 THOC3Q96J01 351 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 VPS50Q96JG6 964 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 PTCHD1Q96NR3 888 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 KCNC2Q96PR1 638 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 FRG2BQ96QU4 278 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MAPKAP1Q9BPZ7 522 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 TUBB6Q9BUF5 446 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 SORBS1Q9BX66 1292 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ASPNQ9BXN1 380 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 ROGDIQ9GZN7 287 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 LHPPQ9H008 270 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 GSTO2Q9H4Y5 243 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 NECTIN3Q9NQS3 549 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 FARSBQ9NSD9 589 aaKnown RBP6.11□□□□□ -1.43
BRCC3-209ENST00000620502 OXSMQ9NWU1 459 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 MKS1Q9NXB0 559 aa6.11□□□□□ -1.43
BRCC3-209ENST00000620502 GPR83Q9NYM4 423 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms