RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC22A11Q9NSA0 550 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 FAM120CQ9NX05 1096 aaKnown RBP7.56□□□□□ -1.2
CPNE3-209ENST00000620393 DLL3Q9NYJ7 618 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 TAS2R1Q9NYW7 299 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 HCN3Q9P1Z3 774 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 PISDQ9UG56 409 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 BTNL2Q9UIR0 455 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 UTS2RQ9UKP6 389 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MAN2B2Q9Y2E5 1009 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 B3GALT1Q9Y5Z6 326 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 FAM186AA6NE01 2351 aa7.56□□□□□ -1.2
CPNE3-209ENST00000620393 IGLV3-12A0A075B6K2 115 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 A0A1W2PRB8 838 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ASPDHA6ND91 283 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MYO1GB0I1T2 1018 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 RNASET2O00584 256 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MRASO14807 208 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 B4GALT2O60909 372 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CPNE3O75131 537 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ERN1O75460 977 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRKRAO75569 313 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 KIAA0754O94854 1291 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 BMP10O95393 424 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 GPR75O95800 540 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ALBP02768 609 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 KLK3P07288 261 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 FHP07954 510 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 KRT16P08779 473 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CSNK2A2P19784 350 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 FBLP22087 321 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PTPN4P29074 926 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MPIP34949 423 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 FRKP42685 505 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CPA2P48052 419 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 XKP51811 444 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 HNRNPFP52597 415 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MAPK10P53779 464 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRR20EP86478 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRR20CP86479 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRR20DP86480 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRR20BP86481 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRR20AP86496 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SHC2P98077 582 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 BIKQ13323 160 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ERV3-1Q14264 604 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MLC1Q15049 377 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CEBPEQ15744 281 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 TIGD2Q4W5G0 525 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 REP15Q6BDI9 236 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 OR52E8Q6IFG1 317 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SLC2A7Q6PXP3 512 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 DLEU7Q6UYE1 221 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 HACD2Q6Y1H2 254 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 COX15Q7KZN9 410 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 OVCH1Q7RTY7 1134 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 TMEM52Q8NDY8 209 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 C7orf57Q8NEG2 295 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 OR5P2Q8WZ92 322 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PMEPA1Q969W9 287 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CIDECQ96AQ7 238 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 EXOSC8Q96B26 276 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ROPN1LQ96C74 230 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SLC7A6OSQ96CW6 309 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 RCN3Q96D15 328 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CCDC115Q96NT0 180 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 OR1F2PQ96R84 312 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 BBS4Q96RK4 519 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 CSF3RQ99062 836 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 DPH2Q9BQC3 489 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MKKSQ9NPJ1 570 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SERHLQ9NQF3 203 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ACSS1Q9NUB1 689 aaPredicted RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 GIMAP4Q9NUV9 329 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 GID8Q9NWU2 228 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SLAMF8Q9P0V8 285 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 C5AR2Q9P296 337 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 TRPC4Q9UBN4 977 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PCDHGB4Q9UN71 923 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SATB2Q9UPW6 733 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ERVK-11Q9UQG0 969 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 MRPS33Q9Y291 106 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 PCDHGA8Q9Y5G5 932 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 ZNF780BQ9Y6R6 833 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 SNRNP200O75643 2136 aaKnown RBP7.55□□□□□ -1.2
CPNE3-209ENST00000620393 KNTC1P50748 2209 aa7.55□□□□□ -1.2
CPNE3-209ENST00000620393 GVINP1Q7Z2Y8 2422 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 A0A096LPI6 279 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 DCDC2BA2VCK2 349 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 PMS2P1A4D2B8 440 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 FAM149AA5PLN7 773 aa7.54□□□□□ -1.2
CPNE3-209ENST00000620393 ERICH4A6NGS2 130 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms