RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 ECHS1P30084 290 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 PHBP35232 272 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 TNFRSF17Q02223 184 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 GTF2H2Q13888 395 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 GTF2H2CQ6P1K8 395 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 GPR180Q86V85 440 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 SRRM1Q8IYB3 904 aaKnown RBP20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 ZCCHC7Q8N3Z6 543 aaKnown RBP20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 OR2M7Q8NG81 312 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 SLC44A1Q8WWI5 657 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 ISL2Q96A47 359 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 SCYL1Q96KG9 808 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 VPS11Q9H270 941 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 RPF2Q9H7B2 306 aaKnown RBP20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 IPPKQ9H8X2 491 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 PRM3Q9NNZ6 103 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 CPSF2Q9P2I0 782 aaKnown RBP20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 RNF11Q9Y3C5 154 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 PCDHGA11Q9Y5H2 935 aa20.59■□□□□ 0.89
NEDD4L-237ENST00000617539 WASHC1A8K0Z3 465 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 E9PLN8 166 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 G3V3Y1 287 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 TMPRSS11DO60235 418 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 CDC40O60508 579 aaKnown RBP eCLIP20.58■□□□□ 0.891e-13■■■□□ 15.6
NEDD4L-237ENST00000617539 UGDHO60701 494 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 ACSL3O95573 720 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 IGKV3-11P04433 115 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 PTGS2P35354 604 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 BSGP35613 385 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 STT3AP46977 705 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 RAP1GDS1P52306 607 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 SMSP52788 366 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 FOLH1Q04609 750 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 CPSF6Q16630 551 aaKnown RBP eCLIP20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 WHAMMP3Q1A5X7 153 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 ZNF750Q32MQ0 723 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 MRM1Q6IN84 353 aaKnown RBP20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 C9orf40Q8IXQ3 194 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 MMGT1Q8N4V1 131 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 L3MBTL4Q8NA19 623 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 FAM57AQ8TBR7 257 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 WDR20Q8TBZ3 569 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 PHF10Q8WUB8 498 aaKnown RBP20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 PPWD1Q96BP3 646 aaKnown RBP20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 SENP5Q96HI0 755 aaPredicted RBP20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 VKORC1Q9BQB6 163 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 CHST11Q9NPF2 352 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 ASB4Q9Y574 426 aa20.58■□□□□ 0.89
NEDD4L-237ENST00000617539 A0A0A6YYD5 115 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 OR7A17O14581 309 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 PRRG2O14669 202 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 PROM1O43490 865 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 PIK3CGP48736 1102 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 NEK2P51955 445 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 KLC3Q6P597 504 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 CD163Q86VB7 1156 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 MARVELD2Q8N4S9 558 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 OR52B6Q8NGF0 335 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 DOK4Q8TEW6 326 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 DGAT2Q96PD7 388 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 CDK15Q96Q40 435 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 MS4A12Q9NXJ0 267 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 PHF11Q9UIL8 331 aa20.57■□□□□ 0.88
NEDD4L-237ENST00000617539 DNAJC13O75165 2243 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 A0A1W2PR48 441 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 PDE9AO76083 593 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 CLDN14O95500 239 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 SNRPB2P08579 225 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 PTX3P26022 381 aaPredicted RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 ARFIP1P53367 373 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 CUL3Q13618 768 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 METTL2BQ6P1Q9 378 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 PTGR2Q8N8N7 351 aaPredicted RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 TANKQ92844 425 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 UCN3Q969E3 161 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 PAFAH2Q99487 392 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 DEFB127Q9H1M4 99 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 DDX31Q9H8H2 851 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 COPS7AQ9UBW8 275 aa20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 MTRF1LQ9UGC7 380 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 TNPO3Q9Y5L0 923 aaKnown RBP20.56■□□□□ 0.88
NEDD4L-237ENST00000617539 NCKAP5O14513 1909 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 FAM166BA8MTA8 275 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 GLSO94925 669 aaPredicted RBP20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 TPOP07202 933 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 COX7A2P14406 83 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 PPIAP62937 165 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 ASPHQ12797 758 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 EMC4Q5J8M3 183 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 RTL4Q6ZR62 310 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 OR5L2Q8NGL0 311 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 FBXL20Q96IG2 436 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 NSUN5Q96P11 429 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 CENPKQ9BS16 269 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 TTTY12Q9BZ98 90 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 TRIM8Q9BZR9 551 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 NOL11Q9H8H0 719 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 ZDHHC11Q9H8X9 412 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 ZBTB26Q9HCK0 441 aa20.55■□□□□ 0.88
NEDD4L-237ENST00000617539 PCTPQ9UKL6 214 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms