RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 TREX1Q9NSU2 369 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 IMPAD1Q9NX62 359 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 ZNF226Q9NYT6 803 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 EPHA6Q9UF33 1036 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 RPH3AQ9Y2J0 694 aaPredicted RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 CCL22O00626 93 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 IRAK2O43187 625 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 RASGRP1O95267 797 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 HAPLN1P10915 354 aaPredicted RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 HSPA7P48741 367 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 RPS7P62081 194 aaKnown RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 P2RY14Q15391 338 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 SPDYE7PQ495Y7 208 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 PLAG1Q6DJT9 500 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 CALHM3Q86XJ0 350 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 PHACTR4Q8IZ21 702 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 FTMTQ8N4E7 242 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 SFT2D1Q8WV19 159 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 LRRC46Q96FV0 321 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 SFXN2Q96NB2 322 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 FAM193BQ96PV7 902 aaPredicted RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 SEPT5Q99719 369 aaPredicted RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 TBL1YQ9BQ87 522 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 CINPQ9BW66 212 aaPredicted RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 GPR62Q9BZJ7 368 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 GAREM1Q9H706 876 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 EQTNQ9NQ60 294 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 ACAD8Q9UKU7 415 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 POMT2Q9UKY4 750 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 AAR2Q9Y312 384 aaKnown RBP11.05□□□□□ -0.64
TP53-222ENST00000617185 SLC6A5Q9Y345 797 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 ZNF451Q9Y4E5 1061 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 SLC22A7Q9Y694 548 aa11.05□□□□□ -0.64
TP53-222ENST00000617185 M0QZQ0 153 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 WRBO00258 174 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 ZNF806P0C7X5 589 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 RHCEP18577 417 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 LCN1P31025 176 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 CDKN2DP55273 166 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PRMT2P55345 433 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 ITKQ08881 620 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PTPRCAPQ14761 206 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 HFEQ30201 348 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PYHIN1Q6K0P9 492 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 ZER1Q7Z7L7 766 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 MSRB3Q8IXL7 192 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 DBF4BQ8NFT6 615 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 RHEBL1Q8TAI7 183 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 NTAN1Q96AB6 310 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 SCLYQ96I15 445 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 SUSD3Q96L08 255 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 SLC38A3Q99624 504 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 GAL3ST1Q99999 423 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 TREX2Q9BQ50 279 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 MED18Q9BUE0 208 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 NKX6-2Q9C056 277 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 C8orf33Q9H7E9 229 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 STARD7Q9NQZ5 370 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 NDUFB11Q9NX14 153 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 MALT1Q9UDY8 824 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 DUSP12Q9UNI6 340 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 MEIKINA0A087WXM9 373 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 TMEM82A0PJX8 343 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 SLC7A4O43246 635 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.64
TP53-222ENST00000617185 RAB3BP20337 219 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 S100PP25815 95 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 RORAP35398 523 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 STARP49675 285 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 VSX2P58304 361 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 VLDLRP98155 873 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PLD1Q13393 1074 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 DOC2BQ14184 412 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 KIAA0040Q15053 153 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 TEAD4Q15561 434 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PAN3Q58A45 887 aaKnown RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 FAM198BQ6UWH4 519 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 RSPO2Q6UXX9 243 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 BEND4Q6ZU67 534 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 TMCO2Q7Z6W1 182 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PCSK9Q8NBP7 692 aaKnown RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 NUDT8Q8WV74 236 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
TP53-222ENST00000617185 ZNF285Q96NJ3 590 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 UCK1Q9HA47 277 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 HS3ST4Q9Y661 456 aa11.04□□□□□ -0.64
TP53-222ENST00000617185 A0A1W2PQ45 241 aaPredicted RBP11.03□□□□□ -0.64
TP53-222ENST00000617185 A0A1W2PQY0 241 aa11.03□□□□□ -0.64
TP53-222ENST00000617185 LCHNA4D1U4 455 aa11.03□□□□□ -0.64
TP53-222ENST00000617185 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
TP53-222ENST00000617185 CASC3O15234 703 aaKnown RBP11.03□□□□□ -0.64
TP53-222ENST00000617185 ESR1P03372 595 aa11.03□□□□□ -0.64
TP53-222ENST00000617185 ACAA1P09110 424 aaPredicted RBP11.03□□□□□ -0.64
TP53-222ENST00000617185 EPHA4P54764 986 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms