RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ARRDC5A6NEK1 342 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 C4orf51C9J302 202 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 H0Y8X5 98 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 H3BMQ9 156 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TOR1BO14657 336 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 RECKO95980 971 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 BCHEP06276 602 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 ITIH1P19827 911 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 CD247P20963 164 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 AK4P27144 223 aaPredicted RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 NTSP30990 170 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 CDH12P55289 794 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 STXBP1P61764 594 aaKnown RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 RPP38P78345 283 aaKnown RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SLAMF1Q13291 335 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TNFAIP8L2Q6P589 184 aaPredicted RBP14.9□□□□□ -0.02
NR1H3-235ENST00000616973 BPIFB6Q8NFQ5 453 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 OR4E2Q8NGC2 313 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SFXN5Q8TD22 340 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 MUL1Q969V5 352 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM19Q96HH6 336 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 COG8Q96MW5 612 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 FEVQ99581 238 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 LHPPQ9H008 270 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 CD93Q9NPY3 652 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 ACER3Q9NUN7 267 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 MMP17Q9ULZ9 603 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 CA5BQ9Y2D0 317 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 POFUT2Q9Y2G5 429 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 SNX11Q9Y5W9 270 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 HS3ST3A1Q9Y663 406 aa14.9□□□□□ -0.02
NR1H3-235ENST00000616973 REV3LO60673 3130 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 MFN2O95140 757 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 IFNW1P05000 195 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 HOXB3P14651 431 aaPredicted RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 GLULP15104 373 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 PCMT1P22061 227 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 AKT2P31751 481 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 RPS15AP62244 130 aaKnown RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 RPS26P62854 115 aaKnown RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 CSNK2BP67870 215 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 SLC35A2P78381 396 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 TGM3Q08188 693 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 MAPK11Q15759 364 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 PROX2Q3B8N5 592 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 DHRS4L2Q6PKH6 230 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 LGI4Q8N135 537 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 SMYD1Q8NB12 490 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 OR8K5Q8NH50 307 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 RASSF5Q8WWW0 418 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 TSACCQ96A04 125 aaPredicted RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 LIN28AQ9H9Z2 209 aaKnown RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 TRNAU1APQ9NX07 287 aaKnown RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 SCN3BQ9NY72 215 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 CD207Q9UJ71 328 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 KCND3Q9UK17 655 aa14.89□□□□□ -0.03
NR1H3-235ENST00000616973 FAM32AQ9Y421 112 aaKnown RBP14.89□□□□□ -0.03
NR1H3-235ENST00000616973 A0A1W2PR48 441 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 F3P13726 295 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 GABRG2P18507 467 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 MATN1P21941 496 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 EPHA2P29317 976 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 ACTR1BP42025 376 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SRP54P61011 504 aaKnown RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 ACTR1AP61163 376 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 KIR2DS3Q14952 304 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 DUSP7Q16829 419 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 EXOC3L2Q2M3D2 409 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SLC44A3Q8N4M1 653 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SLC5A8Q8N695 610 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 NT5CQ8TCD5 201 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SLC35G5Q96KT7 338 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 TMEM168Q9H0V1 697 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SRMSQ9H3Y6 488 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SERHL2Q9H4I8 314 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 ZNF576Q9H609 170 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 CCNB1IP1Q9NPC3 277 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 LYARQ9NX58 379 aaKnown RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 P2RX2Q9UBL9 471 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 APOBEC3BQ9UH17 382 aaKnown RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SH3GLB1Q9Y371 365 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 CEP290O15078 2479 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 NINQ8N4C6 2090 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 TCRBV21S2A2A0A5A6 115 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 TMEM247A6NEH6 219 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 BTN3A3O00478 584 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SH3BP5O60239 455 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 NOL3O60936 208 aaKnown RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 NDUFS2O75306 463 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 GPC1P35052 558 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 SLC19A1P41440 591 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 NCBP2P52298 156 aaKnown RBP eCLIP14.88□□□□□ -0.033e-6■■□□□ 12.6
NR1H3-235ENST00000616973 TP53BP2Q13625 1128 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 CEBPEQ15744 281 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 RPS26P11Q5JNZ5 115 aaPredicted RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 LAIR1Q6GTX8 287 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 RD3Q7Z3Z2 195 aa14.88□□□□□ -0.03
NR1H3-235ENST00000616973 CCDC71Q8IV32 467 aaPredicted RBP14.88□□□□□ -0.03
NR1H3-235ENST00000616973 FLVCR1-AS1Q8TAF5 88 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms