RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 OR5K3A6NET4 321 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 LOC730098B7Z3J9 87 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 ARPC1BO15143 372 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 S1PR4O95977 384 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 TYMPP19971 482 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 SRP9P49458 86 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 GPR176Q14439 515 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 CHRNA6Q15825 494 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 CA5BP1Q8WTZ4 195 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 TOE1Q96GM8 510 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 HRASLS5Q96KN8 279 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 MUSKO15146 869 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 PRAMEF2O60811 474 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 EFCAB14O75071 495 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 TCRBP04435 133 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 URODP06132 367 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 SMIM11AP58511 58 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 NFKB2Q00653 900 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 SCARB2Q14108 478 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 C18orf63Q68DL7 685 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 LETMD1Q6P1Q0 360 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 THEM5Q8N1Q8 247 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 C9orf62Q8N4C0 152 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 NFKBIDQ8NI38 313 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 SECISBP2Q96T21 854 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 TCEAL7Q9BRU2 100 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 ATG10Q9H0Y0 220 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 AP1M2Q9Y6Q5 423 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 FGF1P05230 155 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 INSRRP14616 1297 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 PCSK1P29120 753 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 ETV6P41212 452 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 OMPP47874 163 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 PITPNBP48739 271 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 CLDN8P56748 225 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 XKR6Q5GH73 641 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 BEX5Q5H9J7 111 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 NPAS1Q99742 590 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 LYARQ9NX58 379 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 RAI2Q9Y5P3 530 aa12.99□□□□□ -0.33
PPP4R3B-205ENST00000616288 FGF10O15520 208 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ZNF432O94892 652 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CCL23P55773 120 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CRHR2Q13324 411 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TNK1Q13470 666 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 MFSD13AQ14CX5 517 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 DUOXA1Q1HG43 343 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 SMARCD3Q6STE5 483 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CMIPQ8IY22 773 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 HDDC3Q8N4P3 179 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 DOHHQ9BU89 302 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 MROH8Q9H579 483 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 VNN3Q9NY84 501 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TMEFF2Q9UIK5 374 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 GABRDO14764 452 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 SIGLEC5O15389 551 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 VNN2O95498 520 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ANXA4P09525 319 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 IFNGR2P38484 337 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 MAGEA11P43364 429 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CLDN20P56880 219 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 RAB33AQ14088 237 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 GINS1Q14691 196 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ACOT12Q8WYK0 555 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 REPS1Q96D71 796 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ZBED6CLQ96FA7 236 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ASB8Q9H765 288 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 FBXW11Q9UKB1 542 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ARID1BQ8NFD5 2236 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TJP1Q07157 1748 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 PRSS56P0CW18 603 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ARF4P18085 180 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 CLDN10P78369 228 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 PDZK1IP1Q13113 114 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 SLC10A6Q3KNW5 377 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ZNF791Q3KP31 576 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TRILQ7L0X0 811 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 FAM151AQ8WW52 585 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 P2RY13Q9BPV8 354 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TMEM43Q9BTV4 400 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
PPP4R3B-205ENST00000616288 TRBV23-1A0A0A0MS06 115 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms