RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CHERPQ8IWX8 916 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 ST13P4Q8IZP2 240 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 MARVELD2Q8N4S9 558 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TBC1D19Q8N5T2 526 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ATG16L2Q8NAA4 619 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MFSD9Q8NBP5 474 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PAPD5Q8NDF8 572 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR52N2Q8NGI0 321 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DNAJB8Q8NHS0 232 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FLVCR1-AS1Q8TAF5 88 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC38A5Q8WUX1 472 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ASB12Q8WXK4 309 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SGCDQ92629 289 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TFAP2CQ92754 450 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 UBE2FQ969M7 185 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RERGQ96A58 199 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 TMIGD2Q96BF3 282 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TAMM41Q96BW9 452 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TMEM19Q96HH6 336 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 AMDHD1Q96NU7 426 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 QRFPRQ96P65 431 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TGM7Q96PF1 710 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR2A5Q96R48 311 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC38A3Q99624 504 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MAP3K3Q99759 626 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 WFDC6Q9BQY6 131 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ASPSCR1Q9BZE9 553 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ADNPQ9H2P0 1102 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR51I1Q9H343 314 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RIBC2Q9H4K1 309 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DDX31Q9H8H2 851 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 TM9SF3Q9HD45 589 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CD320Q9NPF0 282 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DNAJB9Q9UBS3 223 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SAMD4AQ9UPU9 718 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 ASB4Q9Y574 426 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 WDFY3Q8IZQ1 3526 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CELSR3Q9NYQ7 3312 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DENND4AQ7Z401 1863 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 A0A1B0GVT2 93 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRAMEF25A6NGN4 478 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 A6NHS1 94 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FRS3O43559 492 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZNF217O75362 1048 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TNFRSF21O75509 655 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SEMA3DO95025 777 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CLPTM1O96005 669 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 HMGN2P05204 90 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 HOXC4P09017 264 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 NR2F1P10589 423 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 THRBP10828 461 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 UQCRC2P22695 453 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PAX7P23759 505 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CD27P26842 260 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RRM2P31350 389 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CXCL12P48061 93 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DHPSP49366 369 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 CCR5P51681 352 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CDH12P55289 794 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 STXBP1P61764 594 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 SHC2P98077 582 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MAT1AQ00266 395 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 KCNAB2Q13303 367 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DAG1Q14118 895 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 LPAL2Q16609 132 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SYT16Q17RD7 645 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 LEXMQ3ZCV2 418 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SPATS1Q496A3 300 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CMPK2Q5EBM0 449 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 INTS11Q5TA45 600 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR2T5Q6IEZ7 315 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZC3H14Q6PJT7 736 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 CAMKMTQ7Z624 323 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SPRED1Q7Z699 444 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CYP4Z1Q86W10 505 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 GATAD2AQ86YP4 633 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TMEM126BQ8IUX1 230 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ADHFE1Q8IWW8 467 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 EID3Q8N140 333 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZNF687Q8N1G0 1237 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ARL14Q8N4G2 192 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 AMER2Q8N7J2 671 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR9A4Q8NGU2 314 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR2T29Q8NH02 315 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 UTP15Q8TED0 518 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR5P2Q8WZ92 322 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC9A6Q92581 669 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC22A18Q96BI1 424 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZG16BQ96DA0 208 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZBED6CLQ96FA7 236 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 METTL2AQ96IZ6 378 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 COL21A1Q96P44 957 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZFYVE21Q9BQ24 234 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 YIPF2Q9BWQ6 316 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FAIM2Q9BWQ8 316 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RSPO3Q9BXY4 272 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 ING2Q9H160 280 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SERHL2Q9H4I8 314 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 YY1AP1Q9H869 796 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 IL1RAPQ9NPH3 570 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms