RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 MAT1AQ00266 395 aaKnown RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 ISXQ2M1V0 245 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 C6orf10Q5SRN2 563 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 NANOGP8Q6NSW7 305 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 PWWP2BQ6NUJ5 590 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 FAM180BQ6P0A1 224 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 RNF111Q6ZNA4 994 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 TMEM126BQ8IUX1 230 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 NATD1Q8N6N6 113 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SLC26A7Q8TE54 656 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 PYDC1Q8WXC3 89 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 MIEF2Q96C03 454 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 INPP5KQ9BT40 448 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SLC7A5P2Q9GIP4 190 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 RPF2Q9H7B2 306 aaKnown RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 NANOGQ9H9S0 305 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SERHLQ9NQF3 203 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 PSME2Q9UL46 239 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SRPK3Q9UPE1 567 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 MAU2Q9Y6X3 613 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 A0A1B0GX78 115 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 PCNX2A6NKB5 2137 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 RNASET2O00584 256 aaKnown RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 POLR1CO15160 346 aaPredicted RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SCRG1O75711 98 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 KCNH1O95259 989 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 TIAF1O95411 115 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 CPSF4O95639 269 aaKnown RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SIM1P81133 766 aaPredicted RBP12.98□□□□□ -0.33
TMEM254-213ENST00000613758 FLOT2Q14254 428 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SYT16Q17RD7 645 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 RABL3Q5HYI8 236 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 CLECL1Q8IZS7 167 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 CCDC115Q96NT0 180 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 CTRCQ99895 268 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SLC35C2Q9NQQ7 365 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 MAN2B2Q9Y2E5 1009 aa12.98□□□□□ -0.33
TMEM254-213ENST00000613758 SPAARA0A1B0GVQ0 90 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 A0A1W2PRB8 838 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 H3BNX3 289 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 RFXANKO14593 260 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PDPK1O15530 556 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 CSO75390 466 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 HSD17B1P14061 328 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ANPEPP15144 967 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 OR1D4P47884 311 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 TRPC1P48995 793 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 LRRC74AQ0VAA2 488 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 TRAP1Q12931 704 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 C1orf189Q5VU69 101 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 OR52E8Q6IFG1 317 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 BHLHE22Q8NFJ8 381 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 OR51Q1Q8NH59 317 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 DNAJB8Q8NHS0 232 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 RNF31Q96EP0 1072 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PEX11GQ96HA9 241 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 SLC39A1Q9NY26 324 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 NUP214P35658 2090 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 A0A096LPI6 279 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 B4E171 279 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 DNAJA2O60884 412 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 GCKP35557 465 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 TSPAN7P41732 249 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 CDKN2CP42773 168 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 HNRNPFP52597 415 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 AP2B1P63010 937 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 SELPLGQ14242 412 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 HES3Q5TGS1 186 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 MSRB3Q8IXL7 192 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 TMEM52Q8NDY8 209 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 NETO1Q8TDF5 533 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PANX1Q96RD7 426 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 CGREF1Q99674 301 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PAIP1Q9H074 479 aaKnown RBP12.97□□□□□ -0.33
TMEM254-213ENST00000613758 VAPAQ9P0L0 249 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PCDHGB4Q9UN71 923 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 ERVK-11Q9UQG0 969 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 LOXL2Q9Y4K0 774 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
TMEM254-213ENST00000613758 TRBV5-3A0A0A0MS03 114 aa12.96□□□□□ -0.33
TMEM254-213ENST00000613758 TM4SF5O14894 197 aa12.96□□□□□ -0.33
TMEM254-213ENST00000613758 ERN1O75460 977 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms