RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ADAP00813 363 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SLC35G6P0C7Q6 338 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ADRB3P13945 408 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PTNP21246 168 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 CPN2P22792 545 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 CD40LGP29965 261 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IDUAP35475 653 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PIN1Q13526 163 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 TBCEQ15813 527 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 NDUFA9Q16795 377 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SYT6Q5T7P8 510 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 NLGN4XQ8N0W4 816 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 DNAJC22Q8N4W6 341 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SCAIQ8N9R8 606 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 RHOXF1Q8NHV9 184 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ZNF671Q8TAW3 534 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 TRNT1Q96Q11 434 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 MCCC1Q96RQ3 725 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 TMEM121BQ9BXQ6 578 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 MYNNQ9NPC7 610 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 NDUFAF4Q9P032 175 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ZNF639Q9UID6 485 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IFT52Q9Y366 437 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 RGPD3A6NKT7 1758 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 RGPD4Q7Z3J3 1758 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SH3D21A4FU49 640 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IGLON5A6NGN9 336 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PLOD3O60568 738 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 STX11O75558 287 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ACPPP15309 386 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IL1RNP18510 177 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 NT5EP21589 574 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 CENPAP49450 140 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 RGS6P49758 472 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 MLLT10P55197 1068 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 WDR5P61964 334 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 AQP6Q13520 282 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 KIAA0040Q15053 153 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 TOR1AIP1Q5JTV8 583 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 DHRS4L2Q6PKH6 230 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 Q6ZNB5 142 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IKBIPQ70UQ0 350 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 IQCF1Q8N6M8 205 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 LRR1Q96L50 414 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 RHNO1Q9BSD3 238 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 DUSP21Q9H596 190 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 FBXO10Q9UK96 956 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 CLDN24A6NM45 220 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PRR23D1E9PI22 279 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 UPK1AO00322 258 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PRR23D2P0DMB1 279 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 OSMP13725 252 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ZNF8P17098 575 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 MYL9P24844 172 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SRP54P61011 504 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 BTN3A2P78410 334 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 TAP2Q03519 686 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 LEXMQ3ZCV2 418 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ATAT1Q5SQI0 421 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 MFSD4BQ5TF39 518 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 XAF1Q6GPH4 301 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ZNF852Q6ZMS4 543 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 KRT74Q7RTS7 529 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 LINC00471Q8N535 108 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 FLCNQ8NFG4 579 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 ALG14Q96F25 216 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 TBX5Q99593 518 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 RAB11FIP5Q9BXF6 653 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 OR51V1Q9H2C8 321 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 AGAP5A6NIR3 686 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 M0R3H8 397 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 AREL1O15033 823 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 LATO43561 262 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 UPK1BO75841 260 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CAPNS1P04632 268 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CA5AP35218 305 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CCR4P51679 360 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 EMP3P54852 163 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CDH11P55287 796 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 HNRNPA0Q13151 305 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 SLAMF1Q13291 335 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 EIF4HQ15056 248 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 C2orf27AQ580R0 203 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CEP78Q5JTW2 689 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 LCN1P1Q5VSP4 162 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR4K5Q8NGD3 323 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR52E4Q8NGH9 312 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 OR56A3Q8NH54 315 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 CHTF18Q8WVB6 975 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 TP53INP1Q96A56 240 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 NIPSNAP1Q9BPW8 284 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 C11orf49Q9H6J7 331 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 MOV10Q9HCE1 1003 aaKnown RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 PSORS1C1Q9UIG5 152 aa8.27□□□□□ -1.09
LIG4-204ENST00000611712 TMEFF2Q9UIK5 374 aaPredicted RBP8.27□□□□□ -1.09
LIG4-204ENST00000611712 NDRG4Q9ULP0 352 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms