RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 DRD3P35462 400 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 ZXDCQ2QGD7 858 aaPredicted RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 CCSMST1Q4G0I0 132 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 TEX261Q6UWH6 196 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 ENPP6Q6UWR7 440 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 GOLGA7Q7Z5G4 137 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 DTWD1Q8N5C7 304 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 CXorf40AQ8TE69 158 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 TUBGCP3Q96CW5 907 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 MSLNLQ96KJ4 702 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 COQ10AQ96MF6 247 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 RBM4BQ9BQ04 359 aaKnown RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 CHCHD6Q9BRQ6 235 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 RBM4Q9BWF3 364 aaKnown RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 C11orf54Q9H0W9 315 aaPredicted RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 IPPKQ9H8X2 491 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 INTS7Q9NVH2 962 aaKnown RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 TRAPPC4Q9Y296 219 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 U3KQ87 197 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 A0A0C4DFX4 3053 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 CST1P01037 141 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 CENPAP49450 140 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 ZNF79Q15937 498 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 TTLL9Q3SXZ7 439 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 ZDHHC20Q5W0Z9 365 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 RDH10Q8IZV5 341 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 VWA5B2Q8N398 1253 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 NUDT8Q8WV74 236 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 ASB15Q8WXK1 588 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 PPP1R16AQ96I34 528 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 FOPNLQ96NB1 174 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 GTPBP2Q9BX10 602 aaKnown RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 LGR4Q9BXB1 951 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 RNF121Q9H920 327 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 SLC52A3Q9NQ40 469 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 SCN3BQ9NY72 215 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.23■□□□□ 0.03
RTN1-209ENST00000611068 C3orf18Q9UK00 162 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 LRRK1Q38SD2 2015 aa15.23■□□□□ 0.03
RTN1-209ENST00000611068 C2CD4DB7Z1M9 353 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 ERN1O75460 977 aaKnown RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 PAK4O96013 591 aaPredicted RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 FHP07954 510 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 CD9P21926 228 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 RPL35P42766 123 aaKnown RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 HTR6P50406 440 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TSTA3Q13630 321 aaPredicted RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 GTF2H2Q13888 395 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 CST6Q15828 149 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 PIP5KL1Q5T9C9 394 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 GTF2H2CQ6P1K8 395 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TMPRSS9Q7Z410 1059 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TIGD4Q8IY51 512 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 SMRP1Q8NCR6 262 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 C12orf57Q99622 126 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TRIM54Q9BYV2 358 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 MUC13Q9H3R2 512 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 COPS3Q9UNS2 423 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TICRRQ7Z2Z1 1910 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 C1QTNF3-AMACRE9PGA6 284 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 OR7A17O14581 309 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 ITPKAP23677 461 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 KIR2DL3P43628 341 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 CCT3P49368 545 aaKnown RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 ATP4BP51164 291 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TAS2R38P59533 333 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 CHRNB3Q05901 458 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 HTR4Q13639 388 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 ELOAQ14241 798 aaKnown RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 NFE2L1Q14494 772 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 LAPTM4AQ15012 233 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 ARMCX4Q5H9R4 360 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TIGD3Q6B0B8 471 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 CFAP206Q8IYR0 622 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 OR4F6Q8NGB9 312 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 WDR48Q8TAF3 677 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TEX37Q96LM6 180 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 NRTNQ99748 197 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TRMOQ9BU70 441 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 NUDT4Q9NZJ9 180 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 DNMT3AQ9Y6K1 912 aaPredicted RBP15.22■□□□□ 0.03
RTN1-209ENST00000611068 V9GYH0 126 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 SPEGQ15772 3267 aa15.22■□□□□ 0.03
RTN1-209ENST00000611068 TRPM6Q9BX84 2022 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 GON4LQ3T8J9 2241 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 GNGT2O14610 69 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 SLC16A6O15403 523 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 NARSO43776 548 aaKnown RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 KLK8O60259 260 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 MVKQ03426 396 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 TATDN3Q17R31 274 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 SYTL3Q4VX76 610 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 FAM98BQ52LJ0 330 aaKnown RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 CACHD1Q5VU97 1274 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 GPRIN3Q6ZVF9 776 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 MIER2Q8N344 545 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 FBXO30Q8TB52 745 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 GPR151Q8TDV0 419 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 RHBDF1Q96CC6 855 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms