RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 ALKBH5Q6P6C2 394 aaKnown RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 ZNF730Q6ZMV8 503 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 TIPARPQ7Z3E1 657 aaKnown RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 SPC24Q8NBT2 197 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 RELL2Q8NC24 303 aaPredicted RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 MRPL24Q96A35 216 aaKnown RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 SPATA13Q96N96 652 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 HEXA-AS1Q9H8Q6 139 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 DEPPQ9NTK1 212 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 ZCCHC3Q9NUD5 404 aaKnown RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 APPL1Q9UKG1 709 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 STYXL1Q9Y6J8 313 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 AGRNO00468 2067 aa3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 TP53BP1Q12888 1972 aaPredicted RBP3.11□□□□□ -1.91
RNU6-88P-201ENST00000606801 RAD54L2Q9Y4B4 1467 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 IGHV3-16A0A0C4DH30 117 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SLC28A1O00337 649 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 KERAO60938 352 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 GAS8O95995 478 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 GSTA2P09210 222 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CCDC159P0C7I6 412 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 ADORA3P0DMS8 318 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 KRT5P13647 590 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 FCARP24071 287 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 IL4RP24394 825 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 OXTRP30559 389 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 RPL9P32969 192 aaKnown RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 TKTL1P51854 596 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 HERV-K104P63124 156 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SRPXP78539 464 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 AP1B1Q10567 949 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 C2orf76Q3KRA6 126 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 WDR25Q64LD2 544 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 B3GLCTQ6Y288 498 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CDHR3Q6ZTQ4 885 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SLC47A2Q86VL8 602 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CCDC71Q8IV32 467 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 LMNTD2Q8IXW0 634 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CHDHQ8NE62 594 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 OR1B1Q8NGR6 318 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 OR4F5Q8NH21 305 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 PCNPQ8WW12 178 aaKnown RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 P3H4Q92791 437 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SLCO4A1Q96BD0 722 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 NTNG2Q96CW9 530 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 DTD2Q96FN9 168 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CFAP36Q96G28 342 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CDHR1Q96JP9 859 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CAPNS2Q96L46 248 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 GPR137Q96N19 417 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 TRIM6Q9C030 488 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 MOB1AQ9H8S9 216 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 NMUR1Q9HB89 426 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 UBE2TQ9NPD8 197 aaPredicted RBP3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 COMMD8Q9NX08 183 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SPATA2Q9UM82 520 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 SNX5Q9Y5X3 404 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
RNU6-88P-201ENST00000606801 CROCCQ5TZA2 2017 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 ACOD1A6NK06 481 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 NEDD8-MDP1E9PL57 170 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 PDHXO00330 501 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 OGTO15294 1046 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 TXNL1O43396 289 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 KIAA0513O60268 411 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 PNPP00491 289 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 TPBGLP0DKB5 382 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 BCL3P20749 454 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 LMO2P25791 158 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 CNN1P51911 297 aaKnown RBP3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 LIMK2P53671 638 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 LMO4P61968 165 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 MS4A2Q01362 244 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 HSPA14Q0VDF9 509 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 P2RY14Q15391 338 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 FAM182AQ5T1J6 154 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 C1orf186Q6ZWK4 172 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 NUFIP2Q7Z417 695 aaKnown RBP3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 RNF130Q86XS8 419 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 GVQW1Q8N7I0 195 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 BANPQ8N9N5 519 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 FAM222BQ8WU58 562 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 ZNF560Q96MR9 790 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 CCDC43Q96MW1 224 aaKnown RBP3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 ATF6BQ99941 703 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 ACAT2Q9BWD1 397 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 STRADBQ9C0K7 418 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 CARD9Q9H257 536 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 SLC26A1Q9H2B4 701 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 ADNPQ9H2P0 1102 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 LIME1Q9H400 295 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 DCLRE1BQ9H816 532 aa3.09□□□□□ -1.91
RNU6-88P-201ENST00000606801 NT5DC2Q9H857 520 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms