RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 NPLQ9BXD5 320 aaPredicted RBP20.38■□□□□ 0.85
USP6NL-204ENST00000606752 UGT2B28Q9BY64 529 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 KLHL3Q9UH77 587 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 MAP4K5Q9Y4K4 846 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF780BQ9Y6R6 833 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 SCN3AQ9NY46 2000 aa20.38■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF860A6NHJ4 632 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 TNFRSF21O75509 655 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CAPNS1P04632 268 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 PNLIPP16233 465 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CD1CP29017 333 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 GPC1P35052 558 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CFHR1Q03591 330 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 FAM98BQ52LJ0 330 aaKnown RBP20.37■□□□□ 0.85
USP6NL-204ENST00000606752 BMP8AQ7Z5Y6 402 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 C11orf65Q8NCR3 313 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SUN3Q8TAQ9 357 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF681Q96N22 645 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 ANKHQ9HCJ1 492 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 OLAHQ9NV23 265 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SLC6A14Q9UN76 642 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 V9GYQ6 96 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SPACA6W5XKT8 324 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SERPINA1P01009 418 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 FCGR1AP12314 374 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 FASP25445 335 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 AVPR2P30518 371 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CCT3P49368 545 aaKnown RBP20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CASP9P55211 416 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 OLR1P78380 273 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CHRNB3Q05901 458 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 RBBP4Q09028 425 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 NR0B2Q15466 257 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 NDUFA9Q16795 377 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF750Q32MQ0 723 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SPDYE7PQ495Y7 208 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 GCNT6Q5T4J0 391 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 OR52E8Q6IFG1 317 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 USP53Q70EK8 1073 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CCDC116Q8IYX3 515 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 SAMD14Q8IZD0 417 aaPredicted RBP20.37■□□□□ 0.85
USP6NL-204ENST00000606752 EID3Q8N140 333 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 ADCY4Q8NFM4 1077 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 FBXO30Q8TB52 745 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 DNAJC9Q8WXX5 260 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CCDC74AQ96AQ1 378 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 RNF145Q96MT1 663 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 CHID1Q9BWS9 393 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 TMEM121BQ9BXQ6 578 aaPredicted RBP20.37■□□□□ 0.85
USP6NL-204ENST00000606752 TMEM38AQ9H6F2 299 aa20.37■□□□□ 0.85
USP6NL-204ENST00000606752 PATE3B3GLJ2 98 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 C8orf89P0DMQ9 161 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 RAP2AP10114 183 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 KDELR2P33947 212 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 PCGF2P35227 344 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 FEN1P39748 380 aaKnown RBP20.36■□□□□ 0.85
USP6NL-204ENST00000606752 PRIM2P49643 509 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 CCT8P50990 548 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 TCTE1Q5JU00 501 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 WLSQ5T9L3 541 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 HMBOX1Q6NT76 420 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 SLC23A3Q6PIS1 610 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 WDR74Q6RFH5 385 aaPredicted RBP20.36■□□□□ 0.85
USP6NL-204ENST00000606752 C6orf120Q7Z4R8 191 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 AMIGO2Q86SJ2 522 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 FAM181AQ8N9Y4 354 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 CATSPER1Q8NEC5 780 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 MAL2Q969L2 176 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 SEMA3GQ9NS98 782 aa20.36■□□□□ 0.85
USP6NL-204ENST00000606752 SIGLEC6O43699 453 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 TPST1O60507 370 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 PRKD3O94806 890 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 BMP2P12643 396 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 ANGPT1Q15389 498 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 GRAMD1BQ3KR37 738 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 TRIM61Q5EBN2 209 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 GARNL3Q5VVW2 1013 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 NIPAL1Q6NVV3 410 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 ENPP6Q6UWR7 440 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 SPRED1Q7Z699 444 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 KBTBD2Q8IY47 623 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 FAM86B1Q8N7N1 296 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 OR4K14Q8NGD5 310 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 N4BP2L2Q92802 583 aaPredicted RBP20.35■□□□□ 0.85
USP6NL-204ENST00000606752 CSF3RQ99062 836 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 ZNF184Q99676 751 aaPredicted RBP20.35■□□□□ 0.85
USP6NL-204ENST00000606752 SEMA6AQ9H2E6 1030 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 AGPAT4Q9NRZ5 378 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 SEMA5BQ9P283 1151 aa20.35■□□□□ 0.85
USP6NL-204ENST00000606752 MN1Q10571 1320 aaPredicted RBP20.35■□□□□ 0.85
USP6NL-204ENST00000606752 SGK494L7N484 410 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 CER1O95813 267 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 CSF2RBP32927 897 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 SKP1P63208 163 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 HSD11B2P80365 405 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 SIM1P81133 766 aaPredicted RBP20.34■□□□□ 0.85
USP6NL-204ENST00000606752 DUSP2Q05923 314 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 FAM53BQ14153 422 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 IZUMO2Q6UXV1 221 aa20.34■□□□□ 0.85
USP6NL-204ENST00000606752 TMEM64Q6YI46 380 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms