RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MIEF1Q9NQG6 463 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 NECTIN3Q9NQS3 549 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 PRTFDC1Q9NRG1 225 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 SDR39U1Q9NRG7 319 aaPredicted RBP7.22□□□□□ -1.25
MSH6-211ENST00000606499 IL17BQ9UHF5 180 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 C3orf18Q9UK00 162 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 NXT1Q9UKK6 140 aaKnown RBP7.22□□□□□ -1.25
MSH6-211ENST00000606499 CES1P1Q9UKY3 287 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 TCFL5Q9UL49 500 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 FARSAQ9Y285 508 aaKnown RBP7.22□□□□□ -1.25
MSH6-211ENST00000606499 MRPS33Q9Y291 106 aaKnown RBP7.22□□□□□ -1.25
MSH6-211ENST00000606499 PCDHA9Q9Y5H5 950 aa7.22□□□□□ -1.25
MSH6-211ENST00000606499 IGKV3D-11A0A0A0MRZ8 115 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 C1QTNF9BB2RNN3 333 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 NDUFAB1O14561 156 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 KLK10O43240 276 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PRMT3O60678 531 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ERAL1O75616 437 aaKnown RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 SLC22A3O75751 556 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CAPNS1P04632 268 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 HEXBP07686 556 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 C1QTNF9P0C862 333 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 C8orf89P0DMQ9 161 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 LAMP1P11279 417 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 COX7A2P14406 83 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 DRD2P14416 443 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 WT1P19544 449 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 EFNA1P20827 205 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 PRPS1L1P21108 318 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 IL10P22301 178 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PTPN4P29074 926 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 IL12AP29459 219 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ZFP36L2P47974 494 aaKnown RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 ATP4BP51164 291 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 EMP2P54851 167 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CLDN8P56748 225 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 HSD17B7P56937 341 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 STX1BP61266 288 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 RPS15P62841 145 aaKnown RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 CBX1P83916 185 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ACTN3Q08043 901 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 SQLEQ14534 574 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 RPS6KA2Q15349 733 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 MPEG1Q2M385 716 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PGS1Q32NB8 556 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PDCD4Q53EL6 469 aaKnown RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 GKAP1Q5VSY0 366 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 METTL21CQ5VZV1 264 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PAOXQ6QHF9 649 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 QSOX2Q6ZRP7 698 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ERMP1Q7Z2K6 904 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 MIER2Q8N344 545 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ZNF248Q8NDW4 579 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 BCAS4Q8TDM0 211 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 KCNE4Q8WWG9 221 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 TANKQ92844 425 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 FGF11Q92914 225 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CIDECQ96AQ7 238 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 ANKRD9Q96BM1 317 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 C8orf44Q96CB5 159 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PPCDCQ96CD2 204 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CNRIP1Q96F85 164 aaPredicted RBP7.21□□□□□ -1.26
MSH6-211ENST00000606499 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PTCHD1Q96NR3 888 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 GPR87Q9BY21 358 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 NMUR2Q9GZQ4 415 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CLMPQ9H6B4 373 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 SLAMF7Q9NQ25 335 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PRDM9Q9NQV7 894 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 EHD3Q9NZN3 535 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ARMCX1Q9P291 453 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 DKK4Q9UBT3 224 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ATP6V1HQ9UI12 483 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 UTS2RQ9UKP6 389 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PADI2Q9Y2J8 665 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 ARL2BPQ9Y2Y0 163 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 PCDHGA6Q9Y5G7 932 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 CLDN16Q9Y5I7 305 aa7.21□□□□□ -1.26
MSH6-211ENST00000606499 IGHV3-20A0A0C4DH32 117 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 TCRBV16S1A1N1A0A5B0 115 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 BLACEA4D250 179 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 GABRR3A8MPY1 467 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 NR5A2O00482 541 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 CLDN4O14493 209 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 FCHO1O14526 889 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 PDPK1O15530 556 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 CTNSO60931 367 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ALOX12BO75342 701 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 GPR75O95800 540 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 PIK3R1P27986 724 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 OTX2P32243 289 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 FEN1P39748 380 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 MRPL19P49406 292 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 DGKQP52824 942 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 CLNS1AP54105 237 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 C21orf58P58505 322 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 IGLV3-21P80748 117 aaPredicted RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 EEF1A2Q05639 463 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms