RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 NLGN2Q8NFZ4 835 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 RAB8BQ92930 207 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 JSRP1Q96MG2 331 aaPredicted RBP20.22■□□□□ 0.83
SH3D19-211ENST00000604030 SOD2P04179 222 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 SLC11A1P49279 550 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 ABRAXAS2Q15018 415 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 UPP1Q16831 310 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 TBC1D25Q3MII6 688 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 GTF2IRD2BQ6EKJ0 949 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 KRTCAP2Q8N6L1 136 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 LSM14AQ8ND56 463 aaKnown RBP20.22■□□□□ 0.83
SH3D19-211ENST00000604030 OR4K17Q8NGC6 315 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 ABCG5Q9H222 651 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 MVB12BQ9H7P6 319 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 INSL6Q9Y581 213 aa20.22■□□□□ 0.83
SH3D19-211ENST00000604030 CREBL2O60519 120 aaPredicted RBP20.21■□□□□ 0.83
SH3D19-211ENST00000604030 STSP08842 583 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 PFKLP17858 780 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 NDUFV2P19404 249 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 AIMP2Q13155 320 aaKnown RBP20.21■□□□□ 0.83
SH3D19-211ENST00000604030 STRA6Q9BX79 667 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 PCTPQ9UKL6 214 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 PCDHGA7Q9Y5G6 932 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 FAM72CH0Y354 149 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 FAM72AQ5TYM5 149 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 FAM72DQ6L9T8 149 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 TMEM53Q6P2H8 277 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 FAM72BQ86X60 149 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 KDM1BQ8NB78 822 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 KCPQ6ZWJ8 1503 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 G3V2L1 256 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 EEF1E1O43324 174 aaKnown RBP20.21■□□□□ 0.83
SH3D19-211ENST00000604030 UGDHO60701 494 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 JRKO75564 520 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 NPR2P20594 1047 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 HNF1BP35680 557 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 STT3AP46977 705 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 SNTB2Q13425 540 aaKnown RBP20.21■□□□□ 0.83
SH3D19-211ENST00000604030 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
SH3D19-211ENST00000604030 ZNF623O75123 536 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 CES4AQ5XG92 561 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 CYB5D2Q8WUJ1 264 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 GATA6Q92908 595 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 TMEM41AQ96HV5 264 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 OR4K3Q96R72 315 aa20.21■□□□□ 0.83
SH3D19-211ENST00000604030 HYKKA2RU49 373 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 BLOC1S5-TXNDC5H3BN57 136 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 RPL10P27635 214 aaKnown RBP20.2■□□□□ 0.83
SH3D19-211ENST00000604030 INHBCP55103 352 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 CDKN2DP55273 166 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 EOGTQ5NDL2 527 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 KLK6Q92876 244 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 FIZ1Q96SL8 496 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 MRI1Q9BV20 369 aa20.2■□□□□ 0.83
SH3D19-211ENST00000604030 HSPA12AO43301 675 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 HMGCLP35914 325 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GPAT4Q86UL3 456 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 PAPD5Q8NDF8 572 aaKnown RBP20.2■□□□□ 0.82
SH3D19-211ENST00000604030 SEC61A2Q9H9S3 476 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 LTN1O94822 1766 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 COL1A1P02452 1464 aaPredicted RBP20.2■□□□□ 0.82
SH3D19-211ENST00000604030 AGAP5A6NIR3 686 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 OR12D1P0DN82 309 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GTF2F2P13984 249 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 CHAF1BQ13112 559 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 FLYWCH1Q4VC44 716 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 TSPAN33Q86UF1 283 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GALNT6Q8NCL4 622 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GPR150Q8NGU9 434 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 ZNF689Q96CS4 500 aaPredicted RBP20.2■□□□□ 0.82
SH3D19-211ENST00000604030 C17orf62Q9BQA9 187 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 TAS2R3Q9NYW6 316 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 LEFTY2O00292 366 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 NME4O00746 187 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 HCRTO43612 131 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GNSP15586 552 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 FUT4P22083 530 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 GCGRP47871 477 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 PREPP48147 710 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 PRKCZQ05513 592 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 SLA2Q9H6Q3 261 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 ASB6Q9NWX5 421 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 VEZF1Q14119 521 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 NTRK2Q16620 822 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 ABHD11Q8NFV4 315 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 METTL2AQ96IZ6 378 aaKnown RBP20.2■□□□□ 0.82
SH3D19-211ENST00000604030 URM1Q9BTM9 101 aaKnown RBP20.2■□□□□ 0.82
SH3D19-211ENST00000604030 DHRS4Q9BTZ2 278 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 PTGES2Q9H7Z7 377 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 ACSL6Q9UKU0 697 aa20.2■□□□□ 0.82
SH3D19-211ENST00000604030 A0A0D9SEW6 157 aa20.19■□□□□ 0.82
SH3D19-211ENST00000604030 UCHL1P09936 223 aa20.19■□□□□ 0.82
SH3D19-211ENST00000604030 CDKN1CP49918 316 aaPredicted RBP20.19■□□□□ 0.82
SH3D19-211ENST00000604030 AFF1P51825 1210 aaKnown RBP20.19■□□□□ 0.82
SH3D19-211ENST00000604030 PTPRCAPQ14761 206 aa20.19■□□□□ 0.82
SH3D19-211ENST00000604030 Q6ZVL8 140 aa20.19■□□□□ 0.82
SH3D19-211ENST00000604030 NUP43Q8NFH3 380 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms