RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CCT3P49368 545 aaKnown RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ID2Q02363 134 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 FGL2Q14314 439 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 CLCA4Q14CN2 919 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 MED22Q15528 200 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 GPAT3Q53EU6 434 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 AGBL4Q5VU57 503 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 BCDIN3DQ7Z5W3 292 aaKnown RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ABHD11Q8NFV4 315 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF420Q8TAQ5 688 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 OTULINQ96BN8 352 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ARSGQ96EG1 525 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF300Q96RE9 604 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 INIPQ9NRY2 104 aa10.97□□□□□ -0.65
ARHGEF1-220ENST00000600274 KMOO15229 486 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF12P17014 697 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 ZNF24P17028 368 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 GRK3P35626 688 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 MAPK9P45984 424 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 CD97P48960 835 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 RPS3AP61247 264 aaKnown RBP10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 NUDT13Q86X67 352 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 OR4N5Q8IXE1 308 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 LAS2Q8IYD9 372 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 TANKQ92844 425 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 C11orf24Q96F05 449 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 ALPK1Q96QP1 1244 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 MRPS30Q9NP92 439 aaKnown RBP10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 SEMA3GQ9NS98 782 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 SPHK1Q9NYA1 384 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 TMCC3Q9ULS5 477 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 GPR34Q9UPC5 381 aa10.96□□□□□ -0.65
ARHGEF1-220ENST00000600274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 KRBA1A5PL33 1030 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 PRAMEF25A6NGN4 478 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC16A6O15403 523 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 CNOT3O75175 753 aaKnown RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 CPNE6O95741 557 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 GSTT2P0CG29 244 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 GSTT2BP0CG30 244 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 RCVRNP35243 200 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 MVDP53602 400 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 ERVK-21P61565 698 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 HOXC5Q00444 222 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 PIN1Q13526 163 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 NDUFAF5Q5TEU4 345 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 CCL4L1Q8NHW4 92 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 TM4SF18Q96CE8 201 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC28A3Q9HAS3 691 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 MYNNQ9NPC7 610 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 C1GALT1Q9NS00 363 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 ATP6V1HQ9UI12 483 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 POM121BA6NF01 834 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 FOXE1O00358 373 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 TNFRSF21O75509 655 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 CXCR2P25025 360 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 PTCHD4Q6ZW05 846 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC22A16Q86VW1 577 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF761Q86XN6 746 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMEFF1Q8IYR6 380 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 IQCF1Q8N6M8 205 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 KAT2AQ92830 837 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 RGMAQ96B86 450 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 CAMK1GQ96NX5 476 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 PHOX2BQ99453 314 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 RNF167Q9H6Y7 350 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 THAP10Q9P2Z0 257 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 NFKBIL1Q9UBC1 381 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZFR2Q9UPR6 939 aaKnown RBP10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 PCDHGA6Q9Y5G7 932 aa10.96□□□□□ -0.66
ARHGEF1-220ENST00000600274 LAMA1P25391 3075 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 CNTRLQ7Z7A1 2325 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TRBV4-1A0A0J9YWV2 114 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 JRKO75564 520 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 CCNB2O95067 398 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 RASGRP1O95267 797 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 IFNA14P01570 189 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 CERS1P27544 350 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 OLR1P78380 273 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 MRPS15P82914 257 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TFF2Q03403 129 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLAMF1Q13291 335 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 GPR19Q15760 415 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 METRNLQ641Q3 311 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 REEP3Q6NUK4 255 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMEM107Q6UX40 140 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 UNC5DQ6UXZ4 953 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 ARMC8Q8IUR7 673 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 LRRC56Q8IYG6 542 aaPredicted RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 FBXL6Q8N531 539 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 OR52E1Q8NGJ3 308 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 GEMIN6Q8WXD5 167 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 MUL1Q969V5 352 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 FCRL1Q96LA6 429 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms